PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021667794.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 529aa    MW: 59734.7 Da    PI: 6.5678
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021667794.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.81.4e-0686107527
                     --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                     +C f++  G+C+ GdrC+F+Hgp
  XP_021667794.1  86 PCYFYFS-GFCSKGDRCSFMHGP 107
                     7998888.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MEEELQKHNT DCVYFLASPL TCKKGMDCEY RHNEIARLNP RDCWYWLAGN CVNPTCGFRH  60
PPLERHAEAP SESGSSSLPA NKTSIPCYFY FSGFCSKGDR CSFMHGPDAS TRTGKSGNTS  120
LAIKEGTPLD NKTSVGNVVS ASTEACANLS KTASGLMLQA KKDIQLPAPE NVIVQSPFPE  180
VALRHCEEAV TVKSDFLLQS DSFIQSRSHV GTDLSSLEQV DGYVEPQECW ESSPGFDVLV  240
DDKSGNLVYE DDQEYLLALD REHRELNNHF QGYEFEDLEY DRTYCDAEVM YKQETYDSFD  300
CLDNVHIIDD VGNRSGFSSD RILDSSLCRK RKLLPMELRV VDLQDCWRKH RVNNGLPVIR  360
STRRHDSSRL LGRGREKPQR PGVSRWLQGR LASKVGKNVF DSFEDNGILL NCANQSGWRR  420
HSRLNRSRLQ NKGKRQAKGQ FLSSEVLRKP VPIERKYNNS STEFTGPKTL AQIKEEKKKA  480
EDNGDYTGKT GNSNRMALAD FEGPKPLSEI LKDKRKMGTV EDDDGSTYD