PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021667793.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 529aa    MW: 59888.9 Da    PI: 7.0949
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021667793.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.81.4e-0686107527
                     --SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHgp 27 
                     +C f++  G+C+ GdrC+F+Hgp
  XP_021667793.1  86 PCYFYFS-GFCSKGDRCSFMHGP 107
                     7998888.*************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MEEELQKHNT DCVYFLASPL TCKKGMDCEY RHNEIARLNP RDCWYWLAGN CVNPTCGFRH  60
PPLERHAEAP SESGSSSLPA NKTSIPCYFY FSGFCSKGDR CSFMHGPDAS TCTGKSGNTS  120
LAFKEGTPLD NKTSVGNVVS ASTEACANLS KTASGLMLQA KKDIQLPAPK NVIVQSPFPE  180
VALRHCEEAV TVKSDFLLQS DSFIQSRSHV CTDLSSVEQV DGYVEPQECW ESSPGFDVLV  240
DDKSGNLVYE DDQEYLLALD REHRELNNHF QGYEFEDLEY DRTYCDTEVM YKQETYDSFD  300
CLDNVHIFDD VGNSSGFSSD RILDSSLRRK RKLLPMELRV VDLQDRWRKH RVNNGLPVIR  360
STRRHDSTRL LGRGREKPQR PGVSQWLQGR LASKVGKNVF DSFKDNGILL NCANQNGWRR  420
HSRLNRSRLQ NKGKRQAKGQ FLSSEVLRKP VPRERKYNNS STEFTGPKSL AQIKEEKKKA  480
EDNGDYTGKT GNSNRMALAD FEGPKPLSEI LKDKRKMGTV EDDDGSTYD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1327333LRRKRKL