PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021667792.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | C3H | ||||||||
Protein Properties | Length: 529aa MW: 59888.9 Da PI: 7.0949 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 19.8 | 1.4e-06 | 86 | 107 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 +C f++ G+C+ GdrC+F+Hgp XP_021667792.1 86 PCYFYFS-GFCSKGDRCSFMHGP 107 7998888.*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence |
MEEELQKHNT DCVYFLASPL TCKKGMDCEY RHNEIARLNP RDCWYWLAGN CVNPTCGFRH 60 PPLERHAEAP SESGSSSLPA NKTSIPCYFY FSGFCSKGDR CSFMHGPDAS TCTGKSGNTS 120 LAFKEGTPLD NKTSVGNVVS ASTEACANLS KTASGLMLQA KKDIQLPAPK NVIVQSPFPE 180 VALRHCEEAV TVKSDFLLQS DSFIQSRSHV CTDLSSVEQV DGYVEPQECW ESSPGFDVLV 240 DDKSGNLVYE DDQEYLLALD REHRELNNHF QGYEFEDLEY DRTYCDTEVM YKQETYDSFD 300 CLDNVHIFDD VGNSSGFSSD RILDSSLRRK RKLLPMELRV VDLQDRWRKH RVNNGLPVIR 360 STRRHDSTRL LGRGREKPQR PGVSQWLQGR LASKVGKNVF DSFKDNGILL NCANQNGWRR 420 HSRLNRSRLQ NKGKRQAKGQ FLSSEVLRKP VPRERKYNNS STEFTGPKSL AQIKEEKKKA 480 EDNGDYTGKT GNSNRMALAD FEGPKPLSEI LKDKRKMGTV EDDDGSTYD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 327 | 333 | LRRKRKL |