PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667525.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 347aa MW: 38739.1 Da PI: 8.2991

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.4	1e-15	59	104	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W Ed +l+++v+ +G+ +W++Ia++++ gR++k+c++rw++ XP_021667525.1 59 RGHWKLAEDTKLKELVAVYGPQNWNLIAEKLQ-GRSGKSCRLRWFNQ 104 899***************************.*********996 PP
2	Myb_DNA-binding	54.7	2.4e-17	111	154	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++++eE+e+l a++ +G++ W++Ia+ ++ gRt++ +k++w+ XP_021667525.1 111 RSAFSEEEEERLMAAHRVYGNK-WALIAQLFP-GRTDNAVKNHWHV 154 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MNNYCTFQLI NGDLHKHGFS EYLSFLESNQ NSSVDDKCKG DKNGEGSVIS GQSSKVCARG 60 HWKLAEDTKL KELVAVYGPQ NWNLIAEKLQ GRSGKSCRLR WFNQLDPRIN RSAFSEEEEE 120 RLMAAHRVYG NKWALIAQLF PGRTDNAVKN HWHVIMARKY REQSFAYRRR KQTEAAKRRA 180 EDGSGSASRI NEVVPNLCNG RIIKPFHHVP LADVNSKGFY DLTSSEDAGT SGRLLFVRSS 240 NLLSLPQGSC AEQTPFDFFS GHKSYEIANQ QEHCSGTTFF VLHNMQQSRN HHFSAGFSDS 300 MASATSQVSV SEPSSSSSLS FAENNAASHF ETTMSPTFID FLGVGAS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MNNYCTFQLI NGDLHKHGFS EYLSFLESNQ NSSVDDKCKG DKNGEGSVIS GQSSKVCARG  60
HWKLAEDTKL KELVAVYGPQ NWNLIAEKLQ GRSGKSCRLR WFNQLDPRIN RSAFSEEEEE  120
RLMAAHRVYG NKWALIAQLF PGRTDNAVKN HWHVIMARKY REQSFAYRRR KQTEAAKRRA  180
EDGSGSASRI NEVVPNLCNG RIIKPFHHVP LADVNSKGFY DLTSSEDAGT SGRLLFVRSS  240
NLLSLPQGSC AEQTPFDFFS GHKSYEIANQ QEHCSGTTFF VLHNMQQSRN HHFSAGFSDS  300
MASATSQVSV SEPSSSSSLS FAENNAASHF ETTMSPTFID FLGVGAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	1e-76	MYB family protein