PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021667509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | GRF | ||||||||
Protein Properties | Length: 388aa MW: 43631.5 Da PI: 8.2363 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.6 | 6e-25 | 77 | 120 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_021667509.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************997 PP | |||||||
2 | QLQ | 57 | 5.7e-20 | 9 | 43 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+P++Ll+ i+ XP_021667509.1 9 PFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIK 43 8******************************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 388 aa Download sequence |
MMSGANKFPF TASQWQELEH QALIFKYMVS GIPIPSDLLF TIKRSCLDSP LSSKLFPRQT 60 SHIGWSCFQM GIGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VATQTATANP SITPTVSSIA KNHSTLLTPP SHSISLLSSE THQNHLHYSG YNSYLNHQFL 180 SSHTSSRPHG IGLSPQDNST PLLLDSGGSC SLSNNYTDYR NRSAYGLKEE VDERAFFSSE 240 PSGSMRSLSS SSLDDAWQFT PLTMSSSSTS SSSNHRSLSG LHNEYSYLQL HSVSDHDAPK 300 QQKQYQQSCL LGSDMKCLLP MKIEREEEPQ KTVHRFFDEW PPKNKDSWLD LDDKSPDSTS 360 VSTTRLSISI PSSSHDFPIF NSRTHNDG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G13960.1 | 5e-56 | GRF family protein |