PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667506.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GRF

Protein Properties

Length: 395aa MW: 44613.6 Da PI: 8.2337

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.6	6.1e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_021667506.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************997 PP
2	QLQ	57	5.8e-20	9	43	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+P++Ll+ i+ XP_021667506.1 9 PFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIK 43 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MMSGANKFPF TASQWQELEH QALIFKYMVS GIPIPSDLLF TIKRSCLDSP LSSKLFPRQT 60 SHIGWSCFQM GIGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VATQTATANP SITPTVSSIA KNHSTLLTPP SHSISLLSSE THQNHLHYSG YNSYLNHQFL 180 SSHTSSRPHG IGLSPQDNST PLLLDSGGSC SLSNNYTDYR TLWFYEKNRS AYGLKEEVDE 240 RAFFSSEPSG SMRSLSSSSL DDAWQFTPLT MSSSSTSSSS NHRSLSGLHN EYSYLQLHSL 300 SDHDAPKQQK QYQQSCLLGS DMKCLLPMKI EREEEPQKTV HRFFDEWPPK NKDSWLDLDD 360 KSPDSTSVST TRLSISIPSS SHDFPIFNSR THNDG

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MMSGANKFPF TASQWQELEH QALIFKYMVS GIPIPSDLLF TIKRSCLDSP LSSKLFPRQT  60
SHIGWSCFQM GIGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE  120
VATQTATANP SITPTVSSIA KNHSTLLTPP SHSISLLSSE THQNHLHYSG YNSYLNHQFL  180
SSHTSSRPHG IGLSPQDNST PLLLDSGGSC SLSNNYTDYR TLWFYEKNRS AYGLKEEVDE  240
RAFFSSEPSG SMRSLSSSSL DDAWQFTPLT MSSSSTSSSS NHRSLSGLHN EYSYLQLHSL  300
SDHDAPKQQK QYQQSCLLGS DMKCLLPMKI EREEEPQKTV HRFFDEWPPK NKDSWLDLDD  360
KSPDSTSVST TRLSISIPSS SHDFPIFNSR THNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	7e-56	GRF family protein