PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021667374.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | YABBY | ||||||||
Protein Properties | Length: 243aa MW: 27329.3 Da PI: 8.5504 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 156.2 | 2.7e-48 | 10 | 171 | 2 | 165 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 +++ se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l ++ +k + s s++++ + + +++ +l+++ ++ + + XP_021667374.1 10 ELVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRKCGHCSN-LSF--LSTRPPFQGQCLDHQLSLQKQGFFSDLRKGQS 101 67789**************************************97766665554433.222..45667766666677777776666666666666 PP YABBY 97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf.Pk 165 ss++ s +++ +p++p v++PPek+ r Psaynrf+k+eiqrika+nP+i hreafsaaaknWa + P+ XP_021667374.1 102 SSSSSSISSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKDEIQRIKAANPEIPHREAFSAAAKNWARYiPN 171 66666778888999*9*************************************************75265 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MNLEEKVSME LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRK 60 CGHCSNLSFL STRPPFQGQC LDHQLSLQKQ GFFSDLRKGQ SSSSSSSISS EPLSPKAPFV 120 VKPPEKKHRL PSAYNRFMKD EIQRIKAANP EIPHREAFSA AAKNWARYIP NLSAGSVSGN 180 GNSVSKKINE VKQAMQWVEI DVESRRDVDE DICIYLNWLI NSNFFQLLCF SFGVMFDGKC 240 FSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 5e-63 | YABBY family protein |