PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667341.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 499aa MW: 55011.5 Da PI: 7.297

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.4	8.6e-43	166	241	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv gC++dls++k+yh+rhkvCevhsk+p+v+v+g+eqrfCqqCsrfh l+efD++krsCr+rLa+hnerrrk+q XP_021667341.1 166 CQVYGCHKDLSSLKDYHKRHKVCEVHSKTPKVIVNGVEQRFCQQCSRFHLLDEFDDGKRSCRKRLAGHNERRRKPQ 241 **************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MESWRYSAEG KGLLFSDEID LSVDSYGRSR KAFTGWDGDS VENMEFIDLG FSEMPRKPFN 60 GSNTGMGILG GGEAGIDSSK IEFSSPSHII ASNSSLESGS NHSNSLMESN SQDSSLIDLK 120 LGRLADGKEA QNSKFLEERS VVSSASPTFQ AKKTRTMSSR SQTPFCQVYG CHKDLSSLKD 180 YHKRHKVCEV HSKTPKVIVN GVEQRFCQQC SRFHLLDEFD DGKRSCRKRL AGHNERRRKP 240 QFGSLSGRPH KLLQPYQGTK ILGTSLPKRA SFLFPNILPG GILYQERYEQ TNCCRPAKLE 300 EKSNYCTNGQ LLPKSFLHLH ANGIQNTSGI SPSATEDLTV FNTTSALHEL SGLSHSSCAL 360 SLLSAESQDL GHSAGIIMAR PFISQARGVS DKLLGAESSE KYVPNVLHSS GMNPIKANHM 420 GSFTVSCAGY SADLHVEPDS FLQESDFLNA KYCVSAENES TVDLLQLSSH LHRVEQQRNS 480 VQVKHEIEEF SSFLTTYGP

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MESWRYSAEG KGLLFSDEID LSVDSYGRSR KAFTGWDGDS VENMEFIDLG FSEMPRKPFN  60
GSNTGMGILG GGEAGIDSSK IEFSSPSHII ASNSSLESGS NHSNSLMESN SQDSSLIDLK  120
LGRLADGKEA QNSKFLEERS VVSSASPTFQ AKKTRTMSSR SQTPFCQVYG CHKDLSSLKD  180
YHKRHKVCEV HSKTPKVIVN GVEQRFCQQC SRFHLLDEFD DGKRSCRKRL AGHNERRRKP  240
QFGSLSGRPH KLLQPYQGTK ILGTSLPKRA SFLFPNILPG GILYQERYEQ TNCCRPAKLE  300
EKSNYCTNGQ LLPKSFLHLH ANGIQNTSGI SPSATEDLTV FNTTSALHEL SGLSHSSCAL  360
SLLSAESQDL GHSAGIIMAR PFISQARGVS DKLLGAESSE KYVPNVLHSS GMNPIKANHM  420
GSFTVSCAGY SADLHVEPDS FLQESDFLNA KYCVSAENES TVDLLQLSSH LHRVEQQRNS  480
VQVKHEIEEF SSFLTTYGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	1e-54	SBP family protein