PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667256.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HSF

Protein Properties

Length: 522aa MW: 56606.1 Da PI: 4.5313

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.8	1.1e-35	48	139	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y++++d++++ ++sws ++nsfvv+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ + weF+++ F +g+k+ll++ XP_021667256.1 48 FLSKTYDMVNDPATDAIVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDC---------WEFANEGFLRGQKHLLKS 133 9******************999************************************9987.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i r+k XP_021667256.1 134 ISRRKP 139 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MDGTISNGGG GGGGGSGDAS TSGSGSGGPR APSAPVPIST QANAPPPFLS KTYDMVNDPA 60 TDAIVSWSPT NNSFVVWNPP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK VDPDCWEFAN 120 EGFLRGQKHL LKSISRRKPA HGHSHQQAQQ PQGQSSSVGA CVEVGKFGLE EEVERLKRDK 180 NVLMQELVRL RQQQQATDGQ LQTMVQRLQG MEQRQQQMMS FLAKAMQSPG FLAQFVQQQN 240 ESNRRITEAN KKRRLKQDGI SENENSGAPD GQIVKYKPLM NEAAKAMLRQ IMKMDASSRM 300 ESYNNGLEDF LAGGGSPSSS GMESGSPSSR ISGVTLQEVP PTTGHSTYVP PVSGLSGHDP 360 ADSVSEIKST PCIPSSEKIT AQFPDISVLV GSQEAPTISI PQSDVVMPTL SQIPEMVPEG 420 IVDIPGEVYM EPEAVNDGFM DLTPIGIGNV SPDPDIDILL ENSSFWDELV QSPVPEDIES 480 SSMDGQTNEN DVQSMDNGWD KTQHVDQLTE QMGLLTSDAK ML

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MDGTISNGGG GGGGGSGDAS TSGSGSGGPR APSAPVPIST QANAPPPFLS KTYDMVNDPA  60
TDAIVSWSPT NNSFVVWNPP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK VDPDCWEFAN  120
EGFLRGQKHL LKSISRRKPA HGHSHQQAQQ PQGQSSSVGA CVEVGKFGLE EEVERLKRDK  180
NVLMQELVRL RQQQQATDGQ LQTMVQRLQG MEQRQQQMMS FLAKAMQSPG FLAQFVQQQN  240
ESNRRITEAN KKRRLKQDGI SENENSGAPD GQIVKYKPLM NEAAKAMLRQ IMKMDASSRM  300
ESYNNGLEDF LAGGGSPSSS GMESGSPSSR ISGVTLQEVP PTTGHSTYVP PVSGLSGHDP  360
ADSVSEIKST PCIPSSEKIT AQFPDISVLV GSQEAPTISI PQSDVVMPTL SQIPEMVPEG  420
IVDIPGEVYM EPEAVNDGFM DLTPIGIGNV SPDPDIDILL ENSSFWDELV QSPVPEDIES  480
SSMDGQTNEN DVQSMDNGWD KTQHVDQLTE QMGLLTSDAK ML

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	257	NKKRRLKQ
2	251	256	KKRRLK
3	251	277	KKRRLKQDGISENENSGAPDGQIVKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-129	HSF family protein