PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021667217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 185aa MW: 20969.8 Da PI: 8.492 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.8 | 1.6e-17 | 18 | 71 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++t++q++ Le+ F +n+++ e + +LA++lg++ rqV +W+qN++a++k XP_021667217.1 18 NKRRLTQDQVRLLERTFTSNKKLEPELKLQLANQLGVPPRQVAIWYQNKKARWK 71 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 105.2 | 5.2e-34 | 18 | 109 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krrl+++qv+lLE++F++++kLepe K +la++Lg+ prqva+W+qn++AR+kt+ lE dy++++ ++++ ++++rLekev +Lreel++ XP_021667217.1 18 NKRRLTQDQVRLLERTFTSNKKLEPELKLQLANQLGVPPRQVAIWYQNKKARWKTQSLELDYNTIQVKLENALADKRRLEKEVIQLREELRK 109 79***************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence |
MDFFQSQSQQ KHLPKNSNKR RLTQDQVRLL ERTFTSNKKL EPELKLQLAN QLGVPPRQVA 60 IWYQNKKARW KTQSLELDYN TIQVKLENAL ADKRRLEKEV IQLREELRKA QEMVFAFNQG 120 IVPSHPHHFH PPPPPPPPLN VSCNSSCDEG GGGSSLHEDV NGEVLQLDEL YACLIGPGAG 180 GSTWG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 1e-43 | HD-ZIP family protein |