PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021666737.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 370aa    MW: 40492.5 Da    PI: 8.0266
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021666737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH246.6e-08122142526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_021666737.1 122 ACPDFRK-GGCKKGDSCEFAHG 142
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    
MMIGESQHSN PTVQIPAWDP FIDEPTSPLL SPFAKCGNAS SPFLDSLTAL HRYLPSNEPD  60
SLSDDLDLPV DAFSCDHFRM YEFKVRRCAR GRSHDWTECP YAHPGEKARR RDPRRYHYSG  120
TACPDFRKGG CKKGDSCEFA HGVFECWLHP ARYRTQPCKD GPACRRRVCF FAHTPDQLRV  180
LPPQSPRGNG SGSGDMEVGS SLRHHFDSYL TKGGSFLSSP TSILISPPVS PQSDSPPISP  240
SSPQVVGGSF NPMSELVASM RGLQLGKTKV GPASWSMQNG SGFESPRGSS LRPGFCSLPS  300
TPTRIISRPG FGQLDIWDSS LGEEPAMERV ESGRDLRAKI YAKLSKENSM NGSNPAASAP  360
DVGWVSELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-112C3H family protein