PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666724.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 385aa MW: 43781.7 Da PI: 6.1199

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666724.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C k Fs+ L H+r+H XP_021666724.1 4 HRCKICFKIFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	12.6	0.0004	237	259	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H XP_021666724.1 237 YKCQTCKKVFKSYQALGGHRASH 259 9************9999998887 PP
3	zf-C2H2	13.4	0.00024	290	312	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++Fs+ L H rtH XP_021666724.1 290 HECPYCFRVFSSGQALGGHKRTH 312 79*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MERHRCKICF KIFSNGRALG GHMRSHMLNL PIPPRPEEEE EEVEEDLQIQ LGKDTESASS 60 SSSEEEAEAE AEAEGDDKGL YYGLRENPKR SIRFVDPEFS FAVDAASVVL QDRESETESS 120 KNPTLRRSKR TKKLLEHQYH HQQQRQEQEN NIKKLNSNKF SKTELWAEPE AVSSISQTTT 180 EEDVAFCLMM LSRDKWKRMK QQNQLEQDEQ AEAEKSIEET DESEEFKFCE SRTRGKYKCQ 240 TCKKVFKSYQ ALGGHRASHK KLKVYTPGKE LKLEPENAGN STSTAEKKVH ECPYCFRVFS 300 SGQALGGHKR THIIGLATTP ARSSSKIEDN MNLIDLNLPA PIDVDDLSQI ELSAVSDAEF 360 VNHIKSFNST NRSAAPAEIR GRNSF

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MERHRCKICF KIFSNGRALG GHMRSHMLNL PIPPRPEEEE EEVEEDLQIQ LGKDTESASS  60
SSSEEEAEAE AEAEGDDKGL YYGLRENPKR SIRFVDPEFS FAVDAASVVL QDRESETESS  120
KNPTLRRSKR TKKLLEHQYH HQQQRQEQEN NIKKLNSNKF SKTELWAEPE AVSSISQTTT  180
EEDVAFCLMM LSRDKWKRMK QQNQLEQDEQ AEAEKSIEET DESEEFKFCE SRTRGKYKCQ  240
TCKKVFKSYQ ALGGHRASHK KLKVYTPGKE LKLEPENAGN STSTAEKKVH ECPYCFRVFS  300
SGQALGGHKR THIIGLATTP ARSSSKIEDN MNLIDLNLPA PIDVDDLSQI ELSAVSDAEF  360
VNHIKSFNST NRSAAPAEIR GRNSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	1e-54	C2H2 family protein