PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021665935.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 200aa    MW: 22635.5 Da    PI: 5.7519
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021665935.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.42.5e-202068149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ie ksn qvtfskRr+g+ KKA+ELS L +a+vavi fs+  k++ +
  XP_021665935.1 20 KPIEAKSNLQVTFSKRRAGLVKKASELSLLSGAQVAVIAFSPGKKVFAF 68
                    68****************************************9999877 PP

Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVTTNKHQKR TKGRQKIEIK PIEAKSNLQV TFSKRRAGLV KKASELSLLS GAQVAVIAFS  60
PGKKVFAFGH PNVDTVLDCY LNEGFDTKEE DPVTSSNNPH VQQWNREYEE AVKELEEEKK  120
CLAMIQEWNK VRESNVNAGF WWDDSIDDMG VEELEEYVRA MKELRRNVGT RANELMMANH  180
FGNQNIGSAL GGFGLGDEPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-38M-type_MADS family protein