PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021665392.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SBP | ||||||||
Protein Properties | Length: 505aa MW: 54388.6 Da PI: 8.1872 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 134.4 | 3.7e-42 | 174 | 250 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ keyh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_021665392.1 174 RCQVYGCNKDLSSSKEYHKRHKVCETHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 250 6**************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MQSWSCVTGG KGLVSNETIS SSDAIAKSKN ALMGWDLKNA CSFGNNMVVS SQQAIENHGF 60 GELIYHELMG KQLPDNSIRD VLSSEAGGGK IINPFMVSTN TFCLEDESTT RLSSSVVDSN 120 SKDSSFIDLK LGRFGGPADA QNSKISKGAS ILSSSESSAP PKKARLGVNS HTARCQVYGC 180 NKDLSSSKEY HKRHKVCETH SKTSKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA 240 GHNERRRKPQ VGIHSGRNER LLQPYNGLAT SRFHGTTLTS FICQDILPTG PLHPEKYGTS 300 NWCRHIKVED GSDFSLLSSI PVTTPIATGS IFSASTNRYP RDLGGLNSYS HSLIRGTSLG 360 NEDLTAFDAV STIQGLAGIT SSSCALSLLS SQSHNYSSHS SGISMACPLV VPGSSTHYSV 420 TQVSEKLTGV SSQASTSGVP NNFSSSGTSS AEGSNFMNAK DHLSCEDGTT IDLLQLSSQL 480 QRVESQKQSM QAKQENDAFC WPHIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 7e-45 | SBP family protein |