PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665390.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 531aa MW: 57105.5 Da PI: 7.6872

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665390.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134.3	4e-42	174	250	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv gC++dls+ keyh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l efD++krsCr+rLa+hnerrrk+q XP_021665390.1 174 RCQVYGCNKDLSSSKEYHKRHKVCETHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQ 250 6**************************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
MQSWSCVTGG KGLVSNETIS SSDAIAKSKN ALMGWDLKNA CSFGNNMVVS SQQAIENHGF 60 GELIYHELMG KQLPDNSIRD VLSSEAGGGK IINPFMVSTN TFCLEDESTT RLSSSVVDSN 120 SKDSSFIDLK LGRFGGPADA QNSKISKGAS ILSSSESSAP PKKARLGVNS HTARCQVYGC 180 NKDLSSSKEY HKRHKVCETH SKTSKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA 240 GHNERRRKPQ VGIHSGRNER LLQPYNGLAT SRFHGTTLTS FICQDILPTG PLHPEKYGTS 300 NWCRHIKVED GSDFSLLSSI PVTTPIATGS IFSASTNRYP RDLGGLNSYS HSLIRGTSLG 360 NEDLTAFDAV STIQGLAGIT SSSCALSLLS SQSHNYSSHS SGISMACPLV VPGSSTHYSV 420 TQVSEKLTGV SSQASTSGVP NNFSSSGTSS AEVSHLGSIP ISDGSDAINF DITDGIYQGS 480 NFMNAKDHLS CEDGTTIDLL QLSSQLQRVE SQKQSMQAKQ ENDAFCWPHI T

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

MQSWSCVTGG KGLVSNETIS SSDAIAKSKN ALMGWDLKNA CSFGNNMVVS SQQAIENHGF  60
GELIYHELMG KQLPDNSIRD VLSSEAGGGK IINPFMVSTN TFCLEDESTT RLSSSVVDSN  120
SKDSSFIDLK LGRFGGPADA QNSKISKGAS ILSSSESSAP PKKARLGVNS HTARCQVYGC  180
NKDLSSSKEY HKRHKVCETH SKTSKVIVNG IEQRFCQQCS RFHLLAEFDD GKRSCRKRLA  240
GHNERRRKPQ VGIHSGRNER LLQPYNGLAT SRFHGTTLTS FICQDILPTG PLHPEKYGTS  300
NWCRHIKVED GSDFSLLSSI PVTTPIATGS IFSASTNRYP RDLGGLNSYS HSLIRGTSLG  360
NEDLTAFDAV STIQGLAGIT SSSCALSLLS SQSHNYSSHS SGISMACPLV VPGSSTHYSV  420
TQVSEKLTGV SSQASTSGVP NNFSSSGTSS AEVSHLGSIP ISDGSDAINF DITDGIYQGS  480
NFMNAKDHLS CEDGTTIDLL QLSSQLQRVE SQKQSMQAKQ ENDAFCWPHI T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	6e-45	SBP family protein