PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021665257.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

TCP

Protein Properties

Length: 347aa MW: 38077.8 Da PI: 6.3756

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021665257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.7	6e-36	20	125	2	102
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai++l+++ + XP_021665257.1 20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELppwhpianntngtmeadQ------------- 101 79**************************************************************776555443322222110............. PP TCP 80 ssasnsssg...kaaksaakskksqk 102 ++ ss+ ++++s+ s + q+ XP_021665257.1 102 --NAGSSEMaiaEQSESSGYSFQLQR 125 ..111111122222222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MKRAEGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD 60 RPSKAVDWLI KKAKSAIDKL AELPPWHPIA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS 120 FQLQRQLADN PSNDSSFITP PIDPGAIPDT MKSLFPTSST ASSMNFQGYP PDIITRTTNH 180 TEDLGLSLHS FQDQDLIHGQ SQADTSHSPS NDQNLFAGSA PVGYEANFQR MMAWSNNTST 240 ENRTGGGFAF NPPQMPPQQA LLGQDSAFSQ RGPLQSSFAQ SIRAWNDLTM ASSDHHRTQE 300 IHQSFIFGSR FASEGLPGFS IPARIQGEEE QSVVSDRPSS SSPNSQH

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MKRAEGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI KKAKSAIDKL AELPPWHPIA NNTNGTMEAD QNAGSSEMAI AEQSESSGYS  120
FQLQRQLADN PSNDSSFITP PIDPGAIPDT MKSLFPTSST ASSMNFQGYP PDIITRTTNH  180
TEDLGLSLHS FQDQDLIHGQ SQADTSHSPS NDQNLFAGSA PVGYEANFQR MMAWSNNTST  240
ENRTGGGFAF NPPQMPPQQA LLGQDSAFSQ RGPLQSSFAQ SIRAWNDLTM ASSDHHRTQE  300
IHQSFIFGSR FASEGLPGFS IPARIQGEEE QSVVSDRPSS SSPNSQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-80	TCP family protein