PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021664941.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family Whirly
Protein Properties Length: 283aa    MW: 31554.7 Da    PI: 9.666
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021664941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly218.37.1e-681062441139
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+kaal+v++++p+f aldsg++kl ++G++ll++a+a+++r+ydW++kq+f+ls+te+++l++l++++sceffhdp +++s+eGk+rk+lk
  XP_021664941.1 106 SIYKGKAALTVEPRAPEFAALDSGAFKLAKEGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGARDSCEFFHDPNKGKSEEGKIRKVLK 200
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                     vePlpdGsG+f+nlsv+n+l++ +es+++P+++ae++vl s+++
  XP_021664941.1 201 VEPLPDGSGHFFNLSVQNKLLNMDESIYIPITRAEYTVLTSAFN 244
                     ****************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MVQLHLLSPQ LSTQNPKLFS HQSVPFHQSF RPTAFNPKIY TLSPTKTSDT TKSKLAVKCR  60
QSEFYEQQRF NSSRSSSTAD TSYVPHSPSA SAGVGELPPR VFVGHSIYKG KAALTVEPRA  120
PEFAALDSGA FKLAKEGFVL LQFAPAAGVR QYDWSRKQVF SLSVTEIGTL ISLGARDSCE  180
FFHDPNKGKS EEGKIRKVLK VEPLPDGSGH FFNLSVQNKL LNMDESIYIP ITRAEYTVLT  240
SAFNYILPYL LGWHAFANSI KPDDHSRVNN ASPRYGGDYE WSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-127Whirly family protein