PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664934.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 598aa MW: 64828.9 Da PI: 7.2771

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664934.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.1e-30	246	305	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + +Cpv+k+v+r+aed +++++tYeg+Hnh+ XP_021664934.1 246 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSpTCPVRKQVQRCAEDMSILITTYEGTHNHP 305 58************************999**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
METSLEKSVA VSASAEEKKM MKSNGDEDGV LLGTTKGEDV MIHVKQEENS RKRPSSMVKN 60 QASLKHEDQL RSAKAEIGEV REENERLKQL LSKMVKDYQS LQKHFCEVVQ EEEAKKSTKL 120 TPIRRDNEES ELVSLSLGRS SSEPKMEEKK SSNLTDGNED NEELNNKGLS LALDCKFEPD 180 STVTMKNPSS ENSFDDEEPK EEEATETCPP SKMLRTTISS GDEVLQQTQT KKTRVSVRTR 240 CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVSPTCPV RKQVQRCAED MSILITTYEG 300 THNHPLPLSA TAMASTTSAA ASMLQSRSSS SQPGLGTSVS APASISPTNG LNFTVSQNNA 360 MRPQQFYFPN SSISTSNSHP TITLDLTAPT STSHFNRFPC APRYSPTCLN FSSSSSSTSL 420 DSNSTMQTLW NPGYSTYGAL SHSRNNNGSL NNIGKHPPQD HLYQPQMQMN SQTAATSQQS 480 LTETIAAATK VIALDPNFRS ALAAAITTFV GNGGSGVREN PGIGEHNSAG LSSKLGDSLT 540 FNALYPSNHG GIGCASSYLN KSPPTQQGSL VSFPPPFPFS ASKSASGSPA NSRDYNKG

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

METSLEKSVA VSASAEEKKM MKSNGDEDGV LLGTTKGEDV MIHVKQEENS RKRPSSMVKN  60
QASLKHEDQL RSAKAEIGEV REENERLKQL LSKMVKDYQS LQKHFCEVVQ EEEAKKSTKL  120
TPIRRDNEES ELVSLSLGRS SSEPKMEEKK SSNLTDGNED NEELNNKGLS LALDCKFEPD  180
STVTMKNPSS ENSFDDEEPK EEEATETCPP SKMLRTTISS GDEVLQQTQT KKTRVSVRTR  240
CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVSPTCPV RKQVQRCAED MSILITTYEG  300
THNHPLPLSA TAMASTTSAA ASMLQSRSSS SQPGLGTSVS APASISPTNG LNFTVSQNNA  360
MRPQQFYFPN SSISTSNSHP TITLDLTAPT STSHFNRFPC APRYSPTCLN FSSSSSSTSL  420
DSNSTMQTLW NPGYSTYGAL SHSRNNNGSL NNIGKHPPQD HLYQPQMQMN SQTAATSQQS  480
LTETIAAATK VIALDPNFRS ALAAAITTFV GNGGSGVREN PGIGEHNSAG LSSKLGDSLT  540
FNALYPSNHG GIGCASSYLN KSPPTQQGSL VSFPPPFPFS ASKSASGSPA NSRDYNKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-74	WRKY family protein