PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664887.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 611aa MW: 67433.5 Da PI: 6.6854

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664887.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5e-13	442	488	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI++Lq XP_021664887.1 442 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYINELQ 488 799*********************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MKIEIGMGGG AWNDEDRAMV AAVLGAKAFN YLISNSVSNE NLLMAIGSDE NLQNKLSDLV 60 DHPNASNFSW NYAIFWQISY SKSGDWVLGW GDGSCREPRE GEESEATRIL NLRFEDETQQ 120 RMRKRVLQKL HTLSGESDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFASGKH 180 VWVADALKSG NDYCVRSFLA KSAGIQTIVL VATDVGVVEL GSVRSVSENM EIVQSIRSIF 240 STNNAVIRAK PMVPVAAPAL PVVNAKKDDN SLFSNVGTVE RVEGIPKIFG QDLNHGHGHG 300 FREKLAVRKM EERPSWDVYQ NGNRLAFSGN RNGLHGSSWA HSFGLKQGSP TEVYGSQTTT 360 NNLQEFVNGV RNQFQPQKQV QMQIDFSGAT SGPSVIGRPV NVESEHSDVE ASCKEERPGT 420 ADDRRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA 480 IAYINELQAK LKLMEAEREK FGSTSRETSA LEVNSNGKNH SQAPEVDIQA SHDEVIVRVS 540 CPLDSHPASR VIQAFKEAQV SVIDSKLAAA NDTVFHTFVV KSQGSEQLTK EKLMAAFSHE 600 PNSLQQLSSV G

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MKIEIGMGGG AWNDEDRAMV AAVLGAKAFN YLISNSVSNE NLLMAIGSDE NLQNKLSDLV  60
DHPNASNFSW NYAIFWQISY SKSGDWVLGW GDGSCREPRE GEESEATRIL NLRFEDETQQ  120
RMRKRVLQKL HTLSGESDED NYALGLDRVT DTEMFFLASM YFSFPRGEGG PGKCFASGKH  180
VWVADALKSG NDYCVRSFLA KSAGIQTIVL VATDVGVVEL GSVRSVSENM EIVQSIRSIF  240
STNNAVIRAK PMVPVAAPAL PVVNAKKDDN SLFSNVGTVE RVEGIPKIFG QDLNHGHGHG  300
FREKLAVRKM EERPSWDVYQ NGNRLAFSGN RNGLHGSSWA HSFGLKQGSP TEVYGSQTTT  360
NNLQEFVNGV RNQFQPQKQV QMQIDFSGAT SGPSVIGRPV NVESEHSDVE ASCKEERPGT  420
ADDRRPRKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNISK MDKASLLGDA  480
IAYINELQAK LKLMEAEREK FGSTSRETSA LEVNSNGKNH SQAPEVDIQA SHDEVIVRVS  540
CPLDSHPASR VIQAFKEAQV SVIDSKLAAA NDTVFHTFVV KSQGSEQLTK EKLMAAFSHE  600
PNSLQQLSSV G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	424	432	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein