PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664816.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C3H

Protein Properties

Length: 298aa MW: 31827 Da PI: 9.951

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	32.7	1.3e-10	106	131	2	27
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 kt+lC+ + Ck+Gd+C+FaHg+ XP_021664816.1 106 KTRLCNKYNTAEACKFGDKCHFAHGE 131 9***********************96 PP
2	zf-CCCH	38.6	1.8e-12	268	292	1	26
--S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHg 26 +kt+lC ++a+ GtC +GdrC+FaHg XP_021664816.1 268 FKTKLCENYAK-GTCTFGDRCRFAHG 292 69*******.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MEYGGGRKRG RPEAALNGNG GPKKTKQEME SFPTAIGSKL KPCTKFFSTS GCPFGEGCHF 60 LHYVPGGYKA ASQMLNLGGK QSLPPPSRNA RVPPSFPDGS SPPAMKTRLC NKYNTAEACK 120 FGDKCHFAHG EWELGKPTGP SVEDPRSIGP VSGRMGRQIY PPHQGFGAAS SFGASATAKI 180 SVDASLSGAV IGKNGVNSKK ICRLTGAKLS IREHETDPNL RNIEFEGTFN QINQATAMVR 240 ELIGNVSHAS GPPMRNHAIH SSGPANNFKT KLCENYAKGT CTFGDRCRFA HGAEELQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06770.1	2e-49	C3H family protein