PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664716.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 983aa MW: 109011 Da PI: 6.8228

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	156	233	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021664716.1 156 VCQVENCGADLSNAKDYHRRHKVCEMHSKASKALVGNFMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 233 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 983 aa Download sequence
MEARFGSETQ AHHFYVMGAT DMRAVGKRNL EWDLNDWKWD GDLFIASPLN PVPSGGMGRQ 60 FFPVTTGIPG NGNSSNSSSS CSDEVNLGID KGKRELEKRR RVLVIEDDNL NGEEVGGLSL 120 KLGGHGYPIN ETEMGSWEGN SGKKTKLVGG RMNRAVCQVE NCGADLSNAK DYHRRHKVCE 180 MHSKASKALV GNFMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK TNPEAVGNGN 240 SLNDEQTSSY LLISLLRILS NIHSNRSDQV AGQDLLSHLL RSLASRTIEH GGRNISGLLQ 300 EPQDLLNDGT SVGNSEQVGC ANVANGANMQ TSSSVKPSIL NNYPAYSEVR DSTVGQVKVN 360 NFDLNDIYID SDDGAEDVER SHVPANMGTS SLDCPSWVQQ DSHQSSPPQT SRNSDSASAQ 420 SPSSSSGDAQ SRTDRIIFKL FGKEPNDFPL VLRTRILDWL SHSPTDIESY IRPGCVILTI 480 YLRQAEAKWE ELCCNLSTSL SRLLDVSDDA FWRTGWVYIR VQHQIAFVCN GQVVVDTSLP 540 IRSTNYSKIL SVKPIAISVS ERAQFVIKGI NLSRPTTRLL CAVEGKYMSQ ENTQELMDGV 600 DNLKGYEELQ CVNFSCSIPT VSGRGFIEIE DHGFSSGYFP FIVAEEDVCS EIRMLEGVLE 660 LAETDAHVTG TGKMEAKNQA MDFIHEIGWL LHRSQLKSRL GHLDPYTDLF PLKRFKWLME 720 FSMDHEWCAV VKKLLNILLK GIVGTGEHSS LNLALSEMGL LHRAVRKNSR SLVELLLRYV 780 PGKSGPENKL LIGGSHEDNL FRPDVKGPAG LTPLHIAAGK DGSEGVVDAL TDDPGMVGIE 840 AWKNARDSTG FTPEDYARLR GHYSYIHLVQ KKINKRTTVG HVLLDIPGTL SDCSINQKQN 900 EEVTTSFEIG QTAMRPIQQP CKLCHQKLDF VTAGRSLLYR PAMLSMVAIA AVCVCVALLF 960 KSCPEVVYVF RPFRWELLDY GAS

Sequence ? help Back to Top

Protein Sequence Length: 983 aa Download sequence

MEARFGSETQ AHHFYVMGAT DMRAVGKRNL EWDLNDWKWD GDLFIASPLN PVPSGGMGRQ  60
FFPVTTGIPG NGNSSNSSSS CSDEVNLGID KGKRELEKRR RVLVIEDDNL NGEEVGGLSL  120
KLGGHGYPIN ETEMGSWEGN SGKKTKLVGG RMNRAVCQVE NCGADLSNAK DYHRRHKVCE  180
MHSKASKALV GNFMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK TNPEAVGNGN  240
SLNDEQTSSY LLISLLRILS NIHSNRSDQV AGQDLLSHLL RSLASRTIEH GGRNISGLLQ  300
EPQDLLNDGT SVGNSEQVGC ANVANGANMQ TSSSVKPSIL NNYPAYSEVR DSTVGQVKVN  360
NFDLNDIYID SDDGAEDVER SHVPANMGTS SLDCPSWVQQ DSHQSSPPQT SRNSDSASAQ  420
SPSSSSGDAQ SRTDRIIFKL FGKEPNDFPL VLRTRILDWL SHSPTDIESY IRPGCVILTI  480
YLRQAEAKWE ELCCNLSTSL SRLLDVSDDA FWRTGWVYIR VQHQIAFVCN GQVVVDTSLP  540
IRSTNYSKIL SVKPIAISVS ERAQFVIKGI NLSRPTTRLL CAVEGKYMSQ ENTQELMDGV  600
DNLKGYEELQ CVNFSCSIPT VSGRGFIEIE DHGFSSGYFP FIVAEEDVCS EIRMLEGVLE  660
LAETDAHVTG TGKMEAKNQA MDFIHEIGWL LHRSQLKSRL GHLDPYTDLF PLKRFKWLME  720
FSMDHEWCAV VKKLLNILLK GIVGTGEHSS LNLALSEMGL LHRAVRKNSR SLVELLLRYV  780
PGKSGPENKL LIGGSHEDNL FRPDVKGPAG LTPLHIAAGK DGSEGVVDAL TDDPGMVGIE  840
AWKNARDSTG FTPEDYARLR GHYSYIHLVQ KKINKRTTVG HVLLDIPGTL SDCSINQKQN  900
EEVTTSFEIG QTAMRPIQQP CKLCHQKLDF VTAGRSLLYR PAMLSMVAIA AVCVCVALLF  960
KSCPEVVYVF RPFRWELLDY GAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein