PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664715.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 1012aa MW: 112168 Da PI: 6.8424

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664715.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	156	233	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv + +qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021664715.1 156 VCQVENCGADLSNAKDYHRRHKVCEMHSKASKALVGNFMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 233 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1012 aa Download sequence
MEARFGSETQ AHHFYVMGAT DMRAVGKRNL EWDLNDWKWD GDLFIASPLN PVPSGGMGRQ 60 FFPVTTGIPG NGNSSNSSSS CSDEVNLGID KGKRELEKRR RVLVIEDDNL NGEEVGGLSL 120 KLGGHGYPIN ETEMGSWEGN SGKKTKLVGG RMNRAVCQVE NCGADLSNAK DYHRRHKVCE 180 MHSKASKALV GNFMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK TNPEAVGNGN 240 SLNDEQTSSY LLISLLRILS NIHSNRSDQV AGQDLLSHLL RSLASRTIEH GGRNISGLLQ 300 EPQDLLNDGT SVGNSEVLST LLSNVEVLPR PIKEHLTVTV SGMLQQVGCA NVANGANMQT 360 SSSVKPSILN NYPAYSEVRD STVGQVKVNN FDLNDIYIDS DDGAEDVERS HVPANMGTSS 420 LDCPSWVQQD SHQSSPPQTS RNSDSASAQS PSSSSGDAQS RTDRIIFKLF GKEPNDFPLV 480 LRTRILDWLS HSPTDIESYI RPGCVILTIY LRQAEAKWEE LCCNLSTSLS RLLDVSDDAF 540 WRTGWVYIRV QHQIAFVCNG QVVVDTSLPI RSTNYSKILS VKPIAISVSE RAQFVIKGIN 600 LSRPTTRLLC AVEGKYMSQE NTQELMDGVD NLKGYEELQC VNFSCSIPTV SGRGFIEIED 660 HGFSSGYFPF IVAEEDVCSE IRMLEGVLEL AETDAHVTGT GKMEAKNQAM DFIHEIGWLL 720 HRSQLKSRLG HLDPYTDLFP LKRFKWLMEF SMDHEWCAVV KKLLNILLKG IVGTGEHSSL 780 NLALSEMGLL HRAVRKNSRS LVELLLRYVP GKSGPENKLL IGGSHEDNLF RPDVKGPAGL 840 TPLHIAAGKD GSEGVVDALT DDPGMVGIEA WKNARDSTGF TPEDYARLRG HYSYIHLVQK 900 KINKRTTVGH VLLDIPGTLS DCSINQKQNE EVTTSFEIGQ TAMRPIQQPC KLCHQKLDFV 960 TAGRSLLYRP AMLSMVAIAA VCVCVALLFK SCPEVVYVFR PFRWELLDYG AS

Sequence ? help Back to Top

Protein Sequence Length: 1012 aa Download sequence

MEARFGSETQ AHHFYVMGAT DMRAVGKRNL EWDLNDWKWD GDLFIASPLN PVPSGGMGRQ  60
FFPVTTGIPG NGNSSNSSSS CSDEVNLGID KGKRELEKRR RVLVIEDDNL NGEEVGGLSL  120
KLGGHGYPIN ETEMGSWEGN SGKKTKLVGG RMNRAVCQVE NCGADLSNAK DYHRRHKVCE  180
MHSKASKALV GNFMQRFCQQ CSRFHVLQEF DEGKRSCRRR LAGHNKRRRK TNPEAVGNGN  240
SLNDEQTSSY LLISLLRILS NIHSNRSDQV AGQDLLSHLL RSLASRTIEH GGRNISGLLQ  300
EPQDLLNDGT SVGNSEVLST LLSNVEVLPR PIKEHLTVTV SGMLQQVGCA NVANGANMQT  360
SSSVKPSILN NYPAYSEVRD STVGQVKVNN FDLNDIYIDS DDGAEDVERS HVPANMGTSS  420
LDCPSWVQQD SHQSSPPQTS RNSDSASAQS PSSSSGDAQS RTDRIIFKLF GKEPNDFPLV  480
LRTRILDWLS HSPTDIESYI RPGCVILTIY LRQAEAKWEE LCCNLSTSLS RLLDVSDDAF  540
WRTGWVYIRV QHQIAFVCNG QVVVDTSLPI RSTNYSKILS VKPIAISVSE RAQFVIKGIN  600
LSRPTTRLLC AVEGKYMSQE NTQELMDGVD NLKGYEELQC VNFSCSIPTV SGRGFIEIED  660
HGFSSGYFPF IVAEEDVCSE IRMLEGVLEL AETDAHVTGT GKMEAKNQAM DFIHEIGWLL  720
HRSQLKSRLG HLDPYTDLFP LKRFKWLMEF SMDHEWCAVV KKLLNILLKG IVGTGEHSSL  780
NLALSEMGLL HRAVRKNSRS LVELLLRYVP GKSGPENKLL IGGSHEDNLF RPDVKGPAGL  840
TPLHIAAGKD GSEGVVDALT DDPGMVGIEA WKNARDSTGF TPEDYARLRG HYSYIHLVQK  900
KINKRTTVGH VLLDIPGTLS DCSINQKQNE EVTTSFEIGQ TAMRPIQQPC KLCHQKLDFV  960
TAGRSLLYRP AMLSMVAIAA VCVCVALLFK SCPEVVYVFR PFRWELLDYG AS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	102	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein