PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664713.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SBP

Protein Properties

Length: 1007aa MW: 111575 Da PI: 6.6673

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.8	5.8e-42	155	232	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C adls+ak+yhrrhkvCe+hska+++lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_021664713.1 155 VCQVENCGADLSNAKDYHRRHKVCEMHSKASKALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNP 232 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1007 aa Download sequence
MEARFGGEAQ AHHFYGMGAT DMRAVGKRNL EWDLNDWNWD GDLFIASPLN PVPSDGMSRQ 60 FFPVTTGIPV NGNSSNSSSS SDEVNLGIEK GKRELEKRRR VIVIEDDNLN GEEVGSLSLK 120 LGGHGYPINE RETGTWEENS GKKTKLVGGR MNRAVCQVEN CGADLSNAKD YHRRHKVCEM 180 HSKASKALVG NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKT NPEAVGNGNS 240 LNDEQTSSYS LISLLRILSN MHSNRSDQAT DQDLLSHLLR SLASHTIEHG GRNISGLLLE 300 SRDGTSTGNS ELLSTLLSNV EVRPRPIKEH LSVTVSGMLQ RVGCAHGANG ANMQTSSSVK 360 PSIPNNYPAC SEVRDSTLGQ VKMNNFDLND IYIDSDDGAE DVDRLPVPTN MGTSSLDCPS 420 WVQQVSHQSS PPQTSGNSDS ASAQSPSSSS GDAQSRTDRI IFKLFGKEPN DFPLVLRAQI 480 LDWLSHSPTD VESYIRPGCV ILTIYLRQAE GTWEELCCNL SSSLSRLLDV SDDAFWRTGW 540 VYIRVRHQIA FVCNGQVVVD ASLPLRGNNC SKISSVKPIA ISASERAQFM IKGINLSQPT 600 TRLLCAVEGK YIFQENTQEL MDCVDTLKGY EELQCVNFCC SIPTASGRGF IEIEDHGFSS 660 SYFPFIVAEE DICSEIRMLE GVLELAETES DFTGTGKMEA KNQAMDFIHE IGWLLHRSQL 720 KSRLGHLDPY TDLFPLKRFK WLMEFSMDHE WCAVVKKLLN ILLKGIVGTG EHSSLNLALS 780 EMGLLHRAVR KNSRSLVELL LRYVPGKSGP ENKLLIGGSH EDNLFRPDVT GPAGLTPLHI 840 AAGKDGSEDV LDALTDDPGM VGIEAWKNAR DSTGFTPEDY ARLRGHYSYI HLVQRKINKR 900 KAVGHVVLDI TGNLSDCSIN QKQNEGVTTS FDIGQTAMRP IQQPCKLCHQ KLDYGTAGRS 960 LLYRPAMLSM VAIAAVCVCV ALLFKSCPEV VYVFRPFRWE LLDYGTS

Sequence ? help Back to Top

Protein Sequence Length: 1007 aa Download sequence

MEARFGGEAQ AHHFYGMGAT DMRAVGKRNL EWDLNDWNWD GDLFIASPLN PVPSDGMSRQ  60
FFPVTTGIPV NGNSSNSSSS SDEVNLGIEK GKRELEKRRR VIVIEDDNLN GEEVGSLSLK  120
LGGHGYPINE RETGTWEENS GKKTKLVGGR MNRAVCQVEN CGADLSNAKD YHRRHKVCEM  180
HSKASKALVG NVMQRFCQQC SRFHVLQEFD EGKRSCRRRL AGHNKRRRKT NPEAVGNGNS  240
LNDEQTSSYS LISLLRILSN MHSNRSDQAT DQDLLSHLLR SLASHTIEHG GRNISGLLLE  300
SRDGTSTGNS ELLSTLLSNV EVRPRPIKEH LSVTVSGMLQ RVGCAHGANG ANMQTSSSVK  360
PSIPNNYPAC SEVRDSTLGQ VKMNNFDLND IYIDSDDGAE DVDRLPVPTN MGTSSLDCPS  420
WVQQVSHQSS PPQTSGNSDS ASAQSPSSSS GDAQSRTDRI IFKLFGKEPN DFPLVLRAQI  480
LDWLSHSPTD VESYIRPGCV ILTIYLRQAE GTWEELCCNL SSSLSRLLDV SDDAFWRTGW  540
VYIRVRHQIA FVCNGQVVVD ASLPLRGNNC SKISSVKPIA ISASERAQFM IKGINLSQPT  600
TRLLCAVEGK YIFQENTQEL MDCVDTLKGY EELQCVNFCC SIPTASGRGF IEIEDHGFSS  660
SYFPFIVAEE DICSEIRMLE GVLELAETES DFTGTGKMEA KNQAMDFIHE IGWLLHRSQL  720
KSRLGHLDPY TDLFPLKRFK WLMEFSMDHE WCAVVKKLLN ILLKGIVGTG EHSSLNLALS  780
EMGLLHRAVR KNSRSLVELL LRYVPGKSGP ENKLLIGGSH EDNLFRPDVT GPAGLTPLHI  840
AAGKDGSEDV LDALTDDPGM VGIEAWKNAR DSTGFTPEDY ARLRGHYSYI HLVQRKINKR  900
KAVGHVVLDI TGNLSDCSIN QKQNEGVTTS FDIGQTAMRP IQQPCKLCHQ KLDYGTAGRS  960
LLYRPAMLSM VAIAAVCVCV ALLFKSCPEV VYVFRPFRWE LLDYGTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	97	101	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	0.0	SBP family protein