PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021664679.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 600aa MW: 64611.9 Da PI: 7.551

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021664679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.7e-30	357	415	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_021664679.1 357 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDKTILTTTYEGNHNHP 415 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 600 aa Download sequence
MDLPYLIQSH SVIFNDATSQ RNTSLFLHAL PLPSHPQILA TRIATSTVMS FSRENNGYSS 60 LWSFVIIFGP PSQATLLNTS VEKNLQPLPP LLLLMDQQGR ELTFFRSGDF LRQNPAALSD 120 HLTDNSIDRG KSTIKEVDFF SNDRTDNLPL DQEMKGESSS AIVDSVVNTG LNLLTSSSGV 180 SEKENGNKLP NNELKKLQAE LDRLHDENKN LRSILDQISK SYKELQAQLL MAMQKQAKGN 240 RGEQKGKLNG IASPIMSAQQ FMDPRPFAAL DVNDPSVSDD KAQDVSVSPT NTTEALSQIN 300 PGKQASTDDG LDQTSQSWGS PKSPRLEPGK NEEQVPEVPF RKARVSVRAR SEAPLITDGC 360 QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED KTILTTTYEG NHNHPLPPAA 420 TAMANTTSAA AAMLLSGSIT SKEGLPSNNS FFPSLPYAST MATLSASAPF PTITLDLTQS 480 PNPIPVFRSP LSTTFPLPLH GCPQPQLLGH PMYVPSKLPA AAIPSVQLGQ RHASMVETVT 540 AAIASDPNFT AALAAAISSV IGTQKSNDGS SSNISAPNGG LTGLPGSPQL PQSCTTFSTN

Sequence ? help Back to Top

Protein Sequence Length: 600 aa Download sequence

MDLPYLIQSH SVIFNDATSQ RNTSLFLHAL PLPSHPQILA TRIATSTVMS FSRENNGYSS  60
LWSFVIIFGP PSQATLLNTS VEKNLQPLPP LLLLMDQQGR ELTFFRSGDF LRQNPAALSD  120
HLTDNSIDRG KSTIKEVDFF SNDRTDNLPL DQEMKGESSS AIVDSVVNTG LNLLTSSSGV  180
SEKENGNKLP NNELKKLQAE LDRLHDENKN LRSILDQISK SYKELQAQLL MAMQKQAKGN  240
RGEQKGKLNG IASPIMSAQQ FMDPRPFAAL DVNDPSVSDD KAQDVSVSPT NTTEALSQIN  300
PGKQASTDDG LDQTSQSWGS PKSPRLEPGK NEEQVPEVPF RKARVSVRAR SEAPLITDGC  360
QWRKYGQKMA KGNPCPRAYY RCTMAVGCPV RKQVQRCAED KTILTTTYEG NHNHPLPPAA  420
TAMANTTSAA AAMLLSGSIT SKEGLPSNNS FFPSLPYAST MATLSASAPF PTITLDLTQS  480
PNPIPVFRSP LSTTFPLPLH GCPQPQLLGH PMYVPSKLPA AAIPSVQLGQ RHASMVETVT  540
AAIASDPNFT AALAAAISSV IGTQKSNDGS SSNISAPNGG LTGLPGSPQL PQSCTTFSTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	9e-92	WRKY family protein