PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021663680.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Whirly

Protein Properties

Length: 219aa MW: 24172.8 Da PI: 10.4316

Description

Whirly family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021663680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Whirly	195.3	9e-61	43	179	1	137
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 sv+k+kaal+v++v ptf++l sgn+k++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l+ XP_021663680.1 43 SVFKGKAALSVQPVPPTFTKLGSGNVKVERRGIMMLTFMPAMGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLS 137 79******************************************************************************************* PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 ++P +dG G+f++lsv n+++++ne+f vP++ +efavl+++ XP_021663680.1 138 IKPQADGGGYFMSLSVVNNILRTNERFNVPLTAGEFAVLKTA 179 **************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MKLSRLLQHS RDASRLQALT FQAGISTARQ DFAANERIYA PYSVFKGKAA LSVQPVPPTF 60 TKLGSGNVKV ERRGIMMLTF MPAMGERKYD YEKRQHFALS ATEVGSLISL GPKDSSEFFH 120 DPSMLSSNAG QVRKSLSIKP QADGGGYFMS LSVVNNILRT NERFNVPLTA GEFAVLKTAC 180 SFALPHIMGW DRLTAKLPKE SVGSPSKANR QEPDIEWAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71260.1	1e-90	Whirly family protein