PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021663678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | Whirly | ||||||||
Protein Properties | Length: 229aa MW: 25305.1 Da PI: 10.4324 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 195.1 | 1e-60 | 53 | 189 | 1 | 137 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 sv+k+kaal+v++v ptf++l sgn+k++r+G ++l++++a++erkyd+ek+q+falsatev++l++l++k+s+effhdp++ +sn+G+vrk+l+ XP_021663678.1 53 SVFKGKAALSVQPVPPTFTKLGSGNVKVERRGIMMLTFMPAMGERKYDYEKRQHFALSATEVGSLISLGPKDSSEFFHDPSMLSSNAGQVRKSLS 147 79********************************************************************************************* PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 ++P +dG G+f++lsv n+++++ne+f vP++ +efavl+++ XP_021663678.1 148 IKPQADGGGYFMSLSVVNNILRTNERFNVPLTAGEFAVLKTA 189 ****************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MKLSRLLQHS RNSLGKYVDV RDASRLQALT FQAGISTARQ DFAANERIYA PYSVFKGKAA 60 LSVQPVPPTF TKLGSGNVKV ERRGIMMLTF MPAMGERKYD YEKRQHFALS ATEVGSLISL 120 GPKDSSEFFH DPSMLSSNAG QVRKSLSIKP QADGGGYFMS LSVVNNILRT NERFNVPLTA 180 GEFAVLKTAC SFALPHIMGW DRLTAKLPKE SVGSPSKANR QEPDIEWAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 7e-91 | Whirly family protein |