PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663065.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 408aa    MW: 44966.4 Da    PI: 7.9207
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663065.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH24.74.2e-08158178526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd C FaHg
  XP_021663065.1 158 ACPDFRK-GNCKKGDACEFAHG 178
                     7******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    
MPVNLHTKSQ TQSNRISPAK KMMLGERHRP NPTIHVPPWA LVDDANPDVY PSSPLSSHSS  60
NAATASDYNP YYLQEALAAL QRYLPSNEPE LDSDSELSGL EPGSPVDAYS CDHFRMFEFK  120
VRRCARGRSH DWTECPYAHP GEKARRRDPR KYHYSGTACP DFRKGNCKKG DACEFAHGVF  180
ECWLHPARYR TQPCKDGPNC RRRVCFFAHT AEQLRVLPQQ SPRSVNSVDS YDGSPLRQAR  240
DASCAKSLPF LASPGSISPP ATPPVESPPM SPMTQSLSRS LGSNSINEMV ASLRNLQLGK  300
VNSLPPSWNA QIGGSGFGSP RGSMVRPGFC SLPSTPTCGP TRSGLSYCDV WENVCEEEPA  360
MERVESGRGL RAKMFEKLSK DYSLGQVDQD PGQSSNGPDV GWVSELLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-145C3H family protein