PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021663007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family SBP
Protein Properties Length: 490aa    MW: 53195.1 Da    PI: 8.6232
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021663007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.37.7e-42189266178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +CqvegC+ dls+ak+yhr+h+vCe hsk+p+v+v+gle+rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk+q+
  XP_021663007.1 189 RCQVEGCNLDLSSAKDYHRKHRVCESHSKSPKVTVAGLERRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPQP 266
                     6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MSSSSLMEWN TKPPIQWDWE NLMMFNATTE HPKKLRLTEW EIDGGRGIDS GSLYSSGSGS  60
GSGTGGSGSG SDLGLASLSK SSKSASINSS SVGEVKTSKL TLEASEAIPE DSNNEKALAK  120
AKPTGTSSLE ASVGSGEALL GLKLGKRTYF EDVCAGNNAK TSSFSVIPGS SVSPVKKSKS  180
SGQASPASRC QVEGCNLDLS SAKDYHRKHR VCESHSKSPK VTVAGLERRF CQQCSRFHGL  240
SEFDEKKRSC RRRLSDHNAR RRKPQPESGQ LNPARLSSSL YGERQQTSLV WNRAPLIHSR  300
PNANLTWEGT SSSKFTITKK CVMKPLKVGG TDGQLNLPGN EMTTSIPMHP HDSKSLLPSK  360
SKVTTVEVLN QDNFAGLEES IISPNVDATQ DLHRALSLLS TNSWGSCEQK SVSHEQPAHT  420
SASHTGMPQS VLHVMSQGMP LASTDYWRTE QTTDSREHTL TAHNDSSSYF QEFQLLRAPY  480
DSDFYSSQLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246263KKRSCRRRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.11e-79SBP family protein