PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662718.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 494aa MW: 54383.2 Da PI: 6.5609

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.9	2.9e-14	216	276	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g+ XP_021662718.1 216 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDREEKAARAYDLAALKYWGH 276 57*****************666664478446***********************997 PP
2	AP2	40.2	8.3e-13	318	367	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f eAa+a++ a+ k++g XP_021662718.1 318 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFEE--EAAEAYDIAAIKFRG 367 57**************988532...5**9987..**********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA 60 EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN 120 DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN 180 ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR 240 REGQARKGRQ VYLGGYDREE KAARAYDLAA LKYWGHTATT NFPVANYTKE LEEMKYVSKQ 300 EFIASLRRKS SGFSRGASIY RGVTRHHQQG RWQARIGRVA GNKDLYLGTF EEEAAEAYDI 360 AAIKFRGMNA VTNFEMSRYD VAAIMKSALP IGGAAKRLKL SLEVEQKPTL NHEQQPRGGS 420 NNINFASMPL DSAIPCGIPF ENTAALYHHS LIHHIQSANN FGGTDSSGST SSMATPMTLL 480 PQTTDFFMWP HQSY

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA  60
EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN  120
DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN  180
ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  240
REGQARKGRQ VYLGGYDREE KAARAYDLAA LKYWGHTATT NFPVANYTKE LEEMKYVSKQ  300
EFIASLRRKS SGFSRGASIY RGVTRHHQQG RWQARIGRVA GNKDLYLGTF EEEAAEAYDI  360
AAIKFRGMNA VTNFEMSRYD VAAIMKSALP IGGAAKRLKL SLEVEQKPTL NHEQQPRGGS  420
NNINFASMPL DSAIPCGIPF ENTAALYHHS LIHHIQSANN FGGTDSSGST SSMATPMTLL  480
PQTTDFFMWP HQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein