PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021662717.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 496aa MW: 54555.4 Da PI: 6.5609

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021662717.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	44.9	2.9e-14	216	276	1	56
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkklege 56 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g+ XP_021662717.1 216 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDREEKAARAYDLAALKYWGH 276 57*****************666664478446***********************997 PP
2	AP2	50.3	6e-16	318	369	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_021662717.1 318 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 369 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA 60 EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN 120 DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN 180 ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR 240 REGQARKGRQ VYLGGYDREE KAARAYDLAA LKYWGHTATT NFPVANYTKE LEEMKYVSKQ 300 EFIASLRRKS SGFSRGASIY RGVTRHHQQG RWQARIGRVA GNKDLYLGTF ATEEEAAEAY 360 DIAAIKFRGM NAVTNFEMSR YDVAAIMKSA LPIGGAAKRL KLSLEVEQKP TLNHEQQPRG 420 GSNNINFASM PLDSAIPCGI PFENTAALYH HSLIHHIQSA NNFGGTDSSG STSSMATPMT 480 LLPQTTDFFM WPHQSY

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MAPATNWLSF SLSPMEMLRS SESQFIYEGS STASPHYLMD NFYANGWGSS KEAQGVTTMA  60
EASILTSFID PEAHHPQAPK LEDFLGDSSS IVRYSDNSQT ETQDSSLTHI YDHGSAAYFN  120
DQQDLKAIAG FQAFSTNSGS EVDDSASMAR TQIVGGEFVG HSIESSGNEL GFSNCTGGNN  180
ALSLGISNQS SAEKAIVPAE SDCPKKIAET FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR  240
REGQARKGRQ VYLGGYDREE KAARAYDLAA LKYWGHTATT NFPVANYTKE LEEMKYVSKQ  300
EFIASLRRKS SGFSRGASIY RGVTRHHQQG RWQARIGRVA GNKDLYLGTF ATEEEAAEAY  360
DIAAIKFRGM NAVTNFEMSR YDVAAIMKSA LPIGGAAKRL KLSLEVEQKP TLNHEQQPRG  420
GSNNINFASM PLDSAIPCGI PFENTAALYH HSLIHHIQSA NNFGGTDSSG STSSMATPMT  480
LLPQTTDFFM WPHQSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein