PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021662072.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 519aa    MW: 57738.8 Da    PI: 6.5069
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021662072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS351.21.6e-1071585141374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lLlecA a+s ++l +a+++L +l ++asp+g +  +R++ayf++A+a+r+ +s+ ++++ l   +       ++ +a+++f++v+P++kf+
  XP_021662072.1 158 LITLLLECAVAISVDNLGEAHRMLLELTQMASPYGpSCAERVVAYFAKAMASRVINSWLGICSPLINHK-------SVHSAFQVFNNVCPFIKFA 245
                     5789*******************************9999**********************97664444.......356899************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+t NqaIlea+++ +rvHiiD+di+qGlQWpaL++ La+R egpp++R+Tg+g     s e l etg++L++fA++lg++fef++ +ak++ ++
  XP_021662072.1 246 HFTSNQAILEAFQRRDRVHIIDLDIMQGLQWPALFHILATRIEGPPHVRMTGMGT----SMELLVETGKQLSNFAKRLGMSFEFHP-IAKKFGEI 335
                     *******************************************************....9**************************.7******* PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++++  +++gE+laV++    h+l+d +++  +    +++l+ +l P+v+++veq+++h ++sFl+rf+ +l+yys+lfdsl a +p ++  r+ 
  XP_021662072.1 336 DVSMVPLRRGETLAVHWLQ--HSLYDATGPDWK----TMRLLEELAPRVITLVEQDISH-GGSFLDRFVGSLHYYSTLFDSLGAFFPCDDPSRHR 423
                     ******************9..999999999888....**********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+ ll rei n++a  g +r  +  ++++Wr+ l + + F +vp+s + ++qa+l+l++++ ++gy++ + +g+l lgWkd +L+++S+W+
  XP_021662072.1 424 IEHCLLYREINNILAIGGPARSGED-KFRHWRSELATrSSFMQVPMSGNSMAQAQLILNMFPpVHGYSLAQGDGTLKLGWKDTSLFTASSWT 514
                     ********************77665.5*****9997549****************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    
MKGGYEVVHG ALDMIPPHEP WDYSSVGFPA APVISSSFPK PVINLERNEL SEWVEHVTKQ  60
LIDDMPDTAS ESLHTDATMV YSEDNNNIVP SSLLMGGDFR PRKAMRRSYF DGGNNGQECH  120
WSNELGQSNI CENLAGSSSA AAAATRGLSR IDEQGLSLIT LLLECAVAIS VDNLGEAHRM  180
LLELTQMASP YGPSCAERVV AYFAKAMASR VINSWLGICS PLINHKSVHS AFQVFNNVCP  240
FIKFAHFTSN QAILEAFQRR DRVHIIDLDI MQGLQWPALF HILATRIEGP PHVRMTGMGT  300
SMELLVETGK QLSNFAKRLG MSFEFHPIAK KFGEIDVSMV PLRRGETLAV HWLQHSLYDA  360
TGPDWKTMRL LEELAPRVIT LVEQDISHGG SFLDRFVGSL HYYSTLFDSL GAFFPCDDPS  420
RHRIEHCLLY REINNILAIG GPARSGEDKF RHWRSELATR SSFMQVPMSG NSMAQAQLIL  480
NMFPPVHGYS LAQGDGTLKL GWKDTSLFTA SSWTSHASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-145GRAS family protein