PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021661791.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | GRF | ||||||||
Protein Properties | Length: 440aa MW: 50051.4 Da PI: 8.599 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 78.4 | 7.1e-25 | 77 | 120 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_021661791.1 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************997 PP | |||||||
2 | QLQ | 55.6 | 1.6e-19 | 9 | 43 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+P +Ll+ i+ XP_021661791.1 9 PFTASQWQELEHQALIFKYMVSGIPIPTDLLFTIK 43 8******************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MMSGTNKFPF TASQWQELEH QALIFKYMVS GIPIPTDLLF TIKRSCLDSP LSSKLFPRQH 60 SHVGWSCFQM GLGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VATQAATANP SITPTISSIT KNHSTLLTPP SHSLSLMSSE THQYHLHYSH LNNQFLSSHT 180 SSRPPGIGLS PQDNATPLLL DSGGSCSLTN ADYRSAYGLK EEVDEHAFFS EHSGSMRNLS 240 GSSLDNAWQF TPLTMSSTST TSSSNQRSSS SLHNEYSYLQ LHSLSDRDHD HDAPKQQKQY 300 QQSYLLGTDM KGLLPAKIER EEEPQKIFHR FFDEWPPKNK DSWLNLDDKS PNSTSVSTTR 360 LSISIPSSSH EFPIFNSRTH NGKFFSFLFC INKFLFVYLI LLVYKHLFFS LFCFLFLGRC 420 LSFQLWGFSI NVQECTCLVG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 6e-55 | GRF family protein |