PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021661572.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

WRKY

Protein Properties

Length: 517aa MW: 57325.7 Da PI: 6.4318

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021661572.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.8	2.9e-30	245	304	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+ XP_021661572.1 245 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 304 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MGREEKKMDI DLSLKIDIEE EVQEVEENGE EEKVDLQETN DNEATATTVT GGEEVDDSSV 60 ELSLQDNTKT EELSALQMQM NRMKEENKVL RRVVEQTMKD YYDLQMKFAV IQQNTQKDPH 120 IFLPINVNDK KALQEPKGSV PEFLDANNHR RLASLPKDND RILGEKDLGL SLRLQIDHSD 180 HHQEREEDYK EEINKEENGN HASVPNNNKL QRTDHHLAGI TSHAASLPNR KARVSVRARC 240 QAATMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPGCPVR KQVQRCLEDM SILITTYEGT 300 HNHPLPVGAT AMASTASAAA SFMLLDSSNP LSDGIHNFTQ SSLPYRGGGA GSHHMFYPYS 360 SPFRSINPND PSKGIVLDLT HNSTHDHPPQ TFPLPSSSSH LSGQPLFSWM QNKSSSHQNN 420 GNNTSAASLR DERGWKGEDQ DKSLAENVTS IASDPKFRVA VAAAITSLIN KEKGTPHAMR 480 PSLFPIKEGE VGSSSTKSRV LESLSAASGK PIRNSSP

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MGREEKKMDI DLSLKIDIEE EVQEVEENGE EEKVDLQETN DNEATATTVT GGEEVDDSSV  60
ELSLQDNTKT EELSALQMQM NRMKEENKVL RRVVEQTMKD YYDLQMKFAV IQQNTQKDPH  120
IFLPINVNDK KALQEPKGSV PEFLDANNHR RLASLPKDND RILGEKDLGL SLRLQIDHSD  180
HHQEREEDYK EEINKEENGN HASVPNNNKL QRTDHHLAGI TSHAASLPNR KARVSVRARC  240
QAATMNDGCQ WRKYGQKIAK GNPCPRAYYR CTVAPGCPVR KQVQRCLEDM SILITTYEGT  300
HNHPLPVGAT AMASTASAAA SFMLLDSSNP LSDGIHNFTQ SSLPYRGGGA GSHHMFYPYS  360
SPFRSINPND PSKGIVLDLT HNSTHDHPPQ TFPLPSSSSH LSGQPLFSWM QNKSSSHQNN  420
GNNTSAASLR DERGWKGEDQ DKSLAENVTS IASDPKFRVA VAAAITSLIN KEKGTPHAMR  480
PSLFPIKEGE VGSSSTKSRV LESLSAASGK PIRNSSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-71	WRKY family protein