PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021661230.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 216aa MW: 24181 Da PI: 8.7022 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 59.8 | 7.8e-19 | 23 | 63 | 1 | 41 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasn 41 aCa+Ck++r+kC++dC+lapyfpa+++++f++vhk+FG+sn XP_021661230.1 23 ACASCKHQRKKCTEDCMLAPYFPADRSREFQAVHKVFGVSN 63 7**************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MQRNNNSSSN SDTSGITVMH LGACASCKHQ RKKCTEDCML APYFPADRSR EFQAVHKVFG 60 VSNNDPILGP LGEYRKIQEE LKSYKNQNQL VQQQQRLPGA GGGMMCKATP GMAAWNNGIN 120 NSNNTNMVNF SHDNGSIIYS SYPFKYVQGP EKVKKQEKDA GSRLLPLPAP SPPQQQRDHS 180 ITSGFTHHQQ YHLPANWQFG YVNGKTMDST LWEEES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 4e-25 | LBD family protein |