PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021661230.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family LBD
Protein Properties Length: 216aa    MW: 24181 Da    PI: 8.7022
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021661230.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26059.87.8e-192363141
          DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasn 41
                    aCa+Ck++r+kC++dC+lapyfpa+++++f++vhk+FG+sn
  XP_021661230.1 23 ACASCKHQRKKCTEDCMLAPYFPADRSREFQAVHKVFGVSN 63
                    7**************************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MQRNNNSSSN SDTSGITVMH LGACASCKHQ RKKCTEDCML APYFPADRSR EFQAVHKVFG  60
VSNNDPILGP LGEYRKIQEE LKSYKNQNQL VQQQQRLPGA GGGMMCKATP GMAAWNNGIN  120
NSNNTNMVNF SHDNGSIIYS SYPFKYVQGP EKVKKQEKDA GSRLLPLPAP SPPQQQRDHS  180
ITSGFTHHQQ YHLPANWQFG YVNGKTMDST LWEEES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.14e-25LBD family protein