PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021661210.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 395aa    MW: 43585.8 Da    PI: 7.8572
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021661210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.97.2e-08147167526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_021661210.1 147 ACPDFRK-GGCKKGDSCEFAHG 167
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MVETSSLYSR DHTSSPFHRA DYVQKMMIGE SPHSNPTVQI PHWDPFFDEP TSPLPSQFTN  60
CGNASSPFLD SLTALHRYLP SNEPDSIGDD LDLPVDAFSC DHFRMYEFKV RRCARGRSHD  120
WTECPYAHPG EKARRRDPRR YHYSGTACPD FRKGGCKKGD SCEFAHGVFE CWLHPARYRT  180
QPCKDGPACR RRVCFFAHTP DQLRVLPQQS PRGNGSGSGD VEVGSPLRHH FDSYLTKAGS  240
FVSSPTSILT SPPMSPPSDS PPISPSSPQV VGGSFNSMSE LVACMRGLQV GKMKVGPASW  300
GMQNGSGFGS PRGSSLRPGF CSLPSTPTRT MSRPGVGQLD FWDPSMEEEP AMERVESGRD  360
LRAKIYAKLS KENSLHRAEP GASAPDVGWV SELVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-125C3H family protein