PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660755.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 905aa    MW: 100196 Da    PI: 6.6268
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.27.7e-24127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_021660755.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_021660755.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp121.65.7e-40253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k
  XP_021660755.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 905 aa     Download sequence    
MRLSSAGFNP QAQEGEKRVL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE  60
VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAELGTPS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPPG LPSFHGIKDD DLGMNSPLMW LRGDGDRGIH SMGFQGLGVT  420
PWMQPRVDAS MLGLQTDMYQ AMAAAALQEM RAIDPSKPST TPLLQFQQHL NLPNRSAALM  480
QPQMLQQSQS QQAFLQGVQE NHHQPQAQVQ TQSHLIQQQL HHQHSLNSQQ QQQQQHSLPQ  540
QQHLVENQQI PNVVSAMSQF ASASQSQSPP LQAISSLCQQ QSFSDSNGNP VTNSVVSPLQ  600
SLICSFSQDE STHLINLPRT SPLITSSVWP SKRAAVEPLI SSGAPQCVLP QVEQLGAHQT  660
NISQSSVSLP PFPGRECSID QEGGTGTDPH SHLLFGVNIE PSSLLLQNGM SSLRGVGSDC  720
DSTTMPFSSS NYMSTTGTDF SLNPAMTPSS CIDESGFLQS PENVGQVNPP TRTFVKVYKS  780
GSFGRSLDIT KFSSYNELRS ELARMFGLEG QLEDPLRSGW QLVFVDREND VLLLGDDPWP  840
EFVNSVWCIK ILSPQEIQQM GKRGLELLNS VPIQRLSNGS CDDYASRQDS RNLSTGITSV  900
GSLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein