PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021660754.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 905aa MW: 100196 Da PI: 6.6268 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 75.2 | 7.7e-24 | 127 | 228 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_021660754.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217 99*****************************8544444..48************************************************..889 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_021660754.1 218 KNQLLLGIRRA 228 9999****997 PP | |||||||
2 | Auxin_resp | 121.6 | 5.7e-40 | 253 | 336 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdldpvrWpnS+Wrs+k XP_021660754.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVK 336 79*********************************9789******************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 905 aa Download sequence |
MRLSSAGFNP QAQEGEKRVL NSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAASTNKE 60 VDAHIPNYPS LPPQLICQLH NVTMHADVET DEVYAQMTLQ PLSPQEQKDA YLPAELGTPS 120 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHDNEWKFR 180 HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL 240 SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYVKAVYHT RVSVGMRFRM 300 LFETEESSVR RYMGTITGIS DLDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT 360 TFPMYPSPFP LRLKRPWPPG LPSFHGIKDD DLGMNSPLMW LRGDGDRGIH SMGFQGLGVT 420 PWMQPRVDAS MLGLQTDMYQ AMAAAALQEM RAIDPSKPST TPLLQFQQHL NLPNRSAALM 480 QPQMLQQSQS QQAFLQGVQE NHHQPQAQVQ TQSHLIQQQL HHQHSLNSQQ QQQQQHSLPQ 540 QQHLVENQQI PNVVSAMSQF ASASQSQSPP LQAISSLCQQ QSFSDSNGNP VTNSVVSPLQ 600 SLICSFSQDE STHLINLPRT SPLITSSVWP SKRAAVEPLI SSGAPQCVLP QVEQLGAHQT 660 NISQSSVSLP PFPGRECSID QEGGTGTDPH SHLLFGVNIE PSSLLLQNGM SSLRGVGSDC 720 DSTTMPFSSS NYMSTTGTDF SLNPAMTPSS CIDESGFLQS PENVGQVNPP TRTFVKVYKS 780 GSFGRSLDIT KFSSYNELRS ELARMFGLEG QLEDPLRSGW QLVFVDREND VLLLGDDPWP 840 EFVNSVWCIK ILSPQEIQQM GKRGLELLNS VPIQRLSNGS CDDYASRQDS RNLSTGITSV 900 GSLDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30330.1 | 0.0 | ARF family protein |