PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660714.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 534aa    MW: 60790.9 Da    PI: 9.7493
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.86.2e-16941701899
                     --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                     +p++f++++g++ ++     l+ +sgr W+v+l  +k++g+++l++GW+eF +   L  g f+vF++++r   f  +v +f+k
  XP_021660714.1  94 IPRRFVRKYGKDLKS--PALLQVPSGRIWKVEL--TKCDGEVWLQNGWQEFLEYYSLAYGSFLVFEYIKRnCHF--NVIIFDK 170
                     9********877545..59999***********..*********************************986777..9999987 PP
2B3581.7e-18304407199
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE...EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.S CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliy.rkksgr...yvltkGWkeFvkangLkegDfvvFkld.gr.s 88 
                     f+ ++ ps+v+    +++p +f  ++  +k   s + tl+ ++gr+W vk+ + +k +++     +t+GW+ F+ +n+L++gD++ F+l+  + s
  XP_021660714.1 304 FLIAMQPSYVHPGEKMTIPASFSVKYfPMK--HSGDATLNGLDGRTWPVKFYIcNKAKNGktlPKITQGWRAFAIDNHLEVGDVCAFELImITgS 396
                     677899********************6444..3448***************5564444444578899*********************7754459 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     +++++v++fr+
  XP_021660714.1 397 KATFKVTIFRR 407
                     9999*****98 PP
3B354.91.6e-17438532199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk  +++ +++++++ +p kf+++++++ +e+++l++e+   r W vkl++  + g+  +t+GW+ Fv++n +++gD+++F+l+++++   +v+
  XP_021660714.1 438 FFKSVISPGHMENHNMHVPQKFISNIKQS-TEKVKLQVEN---RCWLVKLNFYPQIGKGNFTSGWSAFVRENSVRVGDVCIFELINSKSLLVKVT 528
                     899999*****************777655.4555666555...9******99666666669************************9999988899 PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr+
  XP_021660714.1 529 IFRN 532
                     9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    
MSSWVDKIHG LVVPADGQRT NRCCRSDYIL MFAWKVGPAL ACDFSLSLSL IFFSSISLFL  60
LFATSKGELE ETSTLHPRSV NSQPPPAIAS PEGIPRRFVR KYGKDLKSPA LLQVPSGRIW  120
KVELTKCDGE VWLQNGWQEF LEYYSLAYGS FLVFEYIKRN CHFNVIIFDK TASEIYYPIS  180
FTNGDDEEPN NLQEEIQEPR IIQETENDAS VEILDDLPCR KRKEKPPLSF PLPQKMTKVE  240
NPTGNRGLHC PERQDEGNRV FGGISAQKQT PGRIIGRKRR LRAKEKTEAL RRASTNFKSE  300
NPFFLIAMQP SYVHPGEKMT IPASFSVKYF PMKHSGDATL NGLDGRTWPV KFYICNKAKN  360
GKTLPKITQG WRAFAIDNHL EVGDVCAFEL IMITGSKATF KVTIFRRNKG NKHELKDEER  420
YSPGAIEAAK SFTSVHPFFK SVISPGHMEN HNMHVPQKFI SNIKQSTEKV KLQVENRCWL  480
VKLNFYPQIG KGNFTSGWSA FVRENSVRVG DVCIFELINS KSLLVKVTIF RNVK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1220225RKRKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-35B3 family protein