PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660710.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 375aa    MW: 42971.4 Da    PI: 9.673
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660710.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.62.6e-19154256198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-..SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgr...yvltkGWkeFvkangLkegDfvvFkld..grse 89 
                     f+ v+ ps+v+    +++p +fa+++   k  s + +l+ ++gr+W vk+ iy+k   +     +t+GWk F+k+n+L++gD++ F+l+  +  +
  XP_021660710.1 154 FLIVMQPSYVHPGLKMSIPASFAQKYFPAK-HSGDAMLNGLDGRTWPVKFyIYNKANYGhavAKITQGWKVFAKDNHLEVGDVCAFELImiKGFK 247
                     778999*******99***********5444.4459**************94443333334578899*********************87323344 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                     ++++v +fr
  XP_021660710.1 248 ATFKVNIFR 256
                     455666666 PP
2B352.96.7e-17288371188
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     ffkv ++++++k+ ++ +p kf+++++++     ++   + ++r W vkl+   + g+ ++t+GW+ Fv++n +k+gD+++F+l++++
  XP_021660710.1 288 FFKVVISPSHMKNYNMHVPQKFISNIKQS----AEILKLQVENRWWPVKLNLYPQLGKGTFTSGWSAFVRENSVKVGDVCIFELINSK 371
                     89***********99********777644....344445557799*****9999999999***********************99754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MEYYSLAYGS FLVFEYNKRN CHFNVIIFDK TASEIYYPIS VTNGDDREPN NLQEEIQEPM  60
IIHETENDAS IEILDDLPCR KRREKLPLSS PLPQKMMKVE NSPGNTGKRV YGDISGQKQT  120
PDRIVVRKER LRAKEKTEAL RRASTNFKSK DPFFLIVMQP SYVHPGLKMS IPASFAQKYF  180
PAKHSGDAML NGLDGRTWPV KFYIYNKANY GHAVAKITQG WKVFAKDNHL EVGDVCAFEL  240
IMIKGFKATF KVNIFRHNEG NELKLKDEES NSPGAIEAAK SFTSVHPFFK VVISPSHMKN  300
YNMHVPQKFI SNIKQSAEIL KLQVENRWWP VKLNLYPQLG KGTFTSGWSA FVRENSVKVG  360
DVCIFELINS KTLQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18085RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-19B3 family protein