PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660640.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family C3H
Protein Properties Length: 522aa    MW: 57911.6 Da    PI: 8.0867
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.14.6e-063213351226
                     TS--TTTTT-SS-SS CS
         zf-CCCH  12 tGtCkyGdrCkFaHg 26 
                     +G C++G++C+F H+
  XP_021660640.1 321 SGSCPRGEKCHFQHD 335
                     69************7 PP

2zf-CCCH18.53.7e-06346367526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C +f+  G C +G+ C+F H+
  XP_021660640.1 346 VCIDFLIKGKCERGPDCNFKHD 367
                     5********************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 522 aa     Download sequence    
MAPPRILLCG DVLGRLNHLY KRVQSVNKSA GPFDALFCVG QFFPGSPELL EEFMDYVEGR  60
TQIPLPTYFI GDYGVGAPKV LSVASKNSSN LGFKMDGLKI CENLFWLRGS GKFTLYSLSV  120
AYLSGRRSSD SQQFGTYSQD DVDALRALAD EPGIVDLFLT NEWPTGVTNR ATSDIPAGIS  180
DSAGSDSTIS ELVAEIKPRY HIAGAKGLFY AREPYSNIDA VHVTRFFGLA SVGNKDKQKF  240
IHAISPTPGS TMTAVEISMK PSNTTSSPYT FSEQTVHPKE TTKRPSDSVS DSQYWRYDVS  300
QKRQKAGARD GDKLCFKFIY SGSCPRGEKC HFQHDMDARE QYLRGVCIDF LIKGKCERGP  360
DCNFKHDLQS KVESYSHRRH GSENANRSKE CWFCLSSPSV ESHLIISIGE SYYCALAKGP  420
LVQDHVLLIP IEHSPSTLSL PQECESELVR FKNNLKLYFK NGGKEAIIFE WVSKRGTHAN  480
LQAAPVPSSR VAAVQDIFNM AADKLGFKFV AMKCSSRVVE HT