PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660585.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 366aa    MW: 41169.4 Da    PI: 7.5879
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660585.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.91.7e-201053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq t+ kR++gi+KKA+ELS+LCd+++ +++fs+tgk
  XP_021660585.1 10 KLENTNGRQATYGKRKHGIMKKAKELSILCDIDIILLMFSPTGK 53
                    6799**************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT YGKRKHGIMK KAKELSILCD IDIILLMFSP TGKPSICKGK  60
RSIEEVIAKF AQLTPQERAK RKLESLEALK KTFKKLDHDV NIPEFLGTSS QTMEDLSNQS  120
RLLQNQLSEV HKRLSYWTNP DKINNIEHLG QLENSLRESL NKIQAHKEYL GKQQLMSLEC  180
NSQFQNGMHV PFRIGAEQQL PPMPWIPNND SQQIVLPEDP NLLPNRDVEC SASSSFGSYS  240
GYFGTGKSSE LSNSSQENGV NGILNDLSGT ASLRLQLAGQ YPYMPYNLNL LNDTKFQSAA  300
EMNLQESPVD FHVNGSFEAP KPGYDSNPGS WASSSGPCAV TMFDEHLYSQ KDHLYGSNNE  360
EYYRIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.23e-89M-type_MADS family protein