PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660580.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 439aa MW: 48710.9 Da PI: 6.5065

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660580.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.7	4e-16	129	174	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+ +G+ +W++Ia+++ gR++k+c++rw++ XP_021660580.1 129 RGHWRPAEDTKLKELVAHYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 174 899***************************.*********996 PP
2	Myb_DNA-binding	57.3	3.7e-18	181	224	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l +a++++G++ W+ Iar ++ gRt++ +k++w+ XP_021660580.1 181 RRAFTEEEEERLMQAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 224 678*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MDTKCVIYSP SENNQNCCSS PSSSSSAGMV LADIGSLSLS PGYGVTPPAS SSSSSHEMEI 60 GRASWGFPFM GNHQGSDAVL EGKVSDCSDA FGENDTVNHN ANSTEENPNT ENINSGKETD 120 SGQSKLCARG HWRPAEDTKL KELVAHYGPQ NWNLIAEKLE GRSGKSCRLR WFNQLDPRIN 180 RRAFTEEEEE RLMQAHRLYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY REQSSAYRRR 240 KLTQSVHRRA DETSSFLCRD PGTRPEPPPP YSHNIPSAVG LTNLCPYPIG TFFNGGVDYG 300 LNGSPHMTTV GEAVSSIQVQ LPLTEFCAQQ TPYDFFPGPK SNDMMRMFSH SRSWDRPGDE 360 PHNSGFNPQR YPDPYIMAMQ QSNYQSPYYF SDSTASTLPQ VSATEPSLPS SSSVAENTRT 420 VHFETIPPPF IDFLGVGAT

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MDTKCVIYSP SENNQNCCSS PSSSSSAGMV LADIGSLSLS PGYGVTPPAS SSSSSHEMEI  60
GRASWGFPFM GNHQGSDAVL EGKVSDCSDA FGENDTVNHN ANSTEENPNT ENINSGKETD  120
SGQSKLCARG HWRPAEDTKL KELVAHYGPQ NWNLIAEKLE GRSGKSCRLR WFNQLDPRIN  180
RRAFTEEEEE RLMQAHRLYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY REQSSAYRRR  240
KLTQSVHRRA DETSSFLCRD PGTRPEPPPP YSHNIPSAVG LTNLCPYPIG TFFNGGVDYG  300
LNGSPHMTTV GEAVSSIQVQ LPLTEFCAQQ TPYDFFPGPK SNDMMRMFSH SRSWDRPGDE  360
PHNSGFNPQR YPDPYIMAMQ QSNYQSPYYF SDSTASTLPQ VSATEPSLPS SSSVAENTRT  420
VHFETIPPPF IDFLGVGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	4e-78	MYB family protein