PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021660548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | ARF | ||||||||
Protein Properties | Length: 680aa MW: 76420.6 Da PI: 6.2107 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 70.9 | 1.6e-22 | 148 | 249 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f k+lt+sd++++g +++ k++aee+ +++++e ++l +d++g +W +++ +r++++r++lt+GW+ Fv +++L +gD ++F + + XP_021660548.1 148 FSKKLTSSDTSTHGGFSVLKRHAEEFlppmdmSKDPPE-QKLLARDLHGSEWCFRHVFRGQPKRHLLTTGWSAFVTSKKLVAGDAFIFL--RGEH 239 88*****************************8444444.48999*********************************************..4499 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ XP_021660548.1 240 GELRIGIRRA 249 99*****985 PP | |||||||
2 | Auxin_resp | 96.2 | 5.1e-32 | 274 | 359 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl...sGtvvgvsdldpvrWpnSkWrsLk 83 a ha++t+++F+v+Y+P+ s+ eF++++++++k+ ++ +svG+Rf+m fe+e+++e+r+ Gt+vg + +d +rWpnS+WrsLk XP_021660548.1 274 ALHATNTGTMFTVYYHPWISPNEFIIPFDQYVKSAEIDYSVGTRFRMLFEGEECPEQRIerfEGTIVGNEVVDHIRWPNSEWRSLK 359 6799****************************************************9988779*********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 680 aa Download sequence |
MVKGNVVGEV VESSNEVRDE TTNCIADSLP PNNHHGDKDD LYTELWHACA GPIVYVPRAG 60 EKVVYFPQGH AEQVEAYMNQ DGIMEMPIYN LPSMIICKVV CVQLKAEAAT DEVFAQITLL 120 PEAKQDWLSS EEDGNSQPLP RKTYALSFSK KLTSSDTSTH GGFSVLKRHA EEFLPPMDMS 180 KDPPEQKLLA RDLHGSEWCF RHVFRGQPKR HLLTTGWSAF VTSKKLVAGD AFIFLRGEHG 240 ELRIGIRRAL KLQNNVSTAV ISAHSMQHGI LATALHATNT GTMFTVYYHP WISPNEFIIP 300 FDQYVKSAEI DYSVGTRFRM LFEGEECPEQ RIERFEGTIV GNEVVDHIRW PNSEWRSLKV 360 KWDPKSDVFS RPERVSPWNI EPIETVKRKC ISLRHPSKRL RPKDVSLCLF PSMVRDAGLL 420 HGPVEHATQN QSEVFQGQEK GDMVVDDLGA LKPPLISHLI PKNPDSNNKP VGLGNQLHFS 480 VHGPYYPCPS GTVLFPGGNI TRLGLPSCCC PPLSSYGDPE NTMRSRNLSV MKVSSYNSVS 540 QDLRTSELKD ATEFPHTPPN GGGSISEQSK SPSGISPENQ CKNYCSATNL NCTEVLKYGA 600 VRRSVDLTRF DGYEDLIREL DQMFDFRGSL IDGSREWQVT YTDDEGDMML IGDYPWQEFL 660 CMVRRMFICS KEDVGRLNAN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 1e-156 | ARF family protein |