PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021660547.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family ARF
Protein Properties Length: 719aa    MW: 80831.6 Da    PI: 6.1864
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021660547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B370.81.8e-22148249199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f k+lt+sd++++g +++ k++aee+      +++++e ++l  +d++g +W +++ +r++++r++lt+GW+ Fv +++L +gD ++F   + + 
  XP_021660547.1 148 FSKKLTSSDTSTHGGFSVLKRHAEEFlppmdmSKDPPE-QKLLARDLHGSEWCFRHVFRGQPKRHLLTTGWSAFVTSKKLVAGDAFIFL--RGEH 239
                     88*****************************8444444.48999*********************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+++++r+
  XP_021660547.1 240 GELRIGIRRA 249
                     99*****985 PP
2Auxin_resp96.15.5e-32274359183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl...sGtvvgvsdldpvrWpnSkWrsLk 83 
                     a ha++t+++F+v+Y+P+ s+ eF++++++++k+ ++ +svG+Rf+m fe+e+++e+r+    Gt+vg + +d +rWpnS+WrsLk
  XP_021660547.1 274 ALHATNTGTMFTVYYHPWISPNEFIIPFDQYVKSAEIDYSVGTRFRMLFEGEECPEQRIerfEGTIVGNEVVDHIRWPNSEWRSLK 359
                     6799****************************************************9988779*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MVKGNVVGEV VESSNEVRDE TTNCIADSLP PNNHHGDKDD LYTELWHACA GPIVYVPRAG  60
EKVVYFPQGH AEQVEAYMNQ DGIMEMPIYN LPSMIICKVV CVQLKAEAAT DEVFAQITLL  120
PEAKQDWLSS EEDGNSQPLP RKTYALSFSK KLTSSDTSTH GGFSVLKRHA EEFLPPMDMS  180
KDPPEQKLLA RDLHGSEWCF RHVFRGQPKR HLLTTGWSAF VTSKKLVAGD AFIFLRGEHG  240
ELRIGIRRAL KLQNNVSTAV ISAHSMQHGI LATALHATNT GTMFTVYYHP WISPNEFIIP  300
FDQYVKSAEI DYSVGTRFRM LFEGEECPEQ RIERFEGTIV GNEVVDHIRW PNSEWRSLKV  360
KWDPKSDVFS RPERVSPWNI EPIETVKRKC ISLRHPSKRL RPKDVSLCLF PSMVRDAGLL  420
HGPVEHATQN QSEVFQGQEK GDMVVDDLGA LKPPLISHLI PKNPDSNNKP VGLGNQLHFS  480
VHGPYYPCPS GTVLFPGGNI TRLGLPSCCC PPLSSYGDPE NTMRSRNLSV MKVSSYNSVS  540
QDLRTSELKD ATEFPHTPPN GGGRYMLFGV NLVKSPPELP SPQVANYSDH ESLYSVLQMS  600
QCSISEQSKS PSGISPENQC KNYCSATNLN CTEVLKYGAV RRSVDLTRFD GYEDLIRELD  660
QMFDFRGSLI DGSREWQVTY TDDEGDMMLI GDYPWQEFLC MVRRMFICSK EDVGRLNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.31e-156ARF family protein