PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660371.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 961aa MW: 105222 Da PI: 4.778

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	6.7e-10	836	877	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++++++q+G++ + I + ++ gRt+ q+k+++ k XP_021660371.1 836 RWSKQDTELFYEGIRQFGTD-LSMIQQLFP-GRTRHQIKLKFKK 877 9*****************.*****.********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 961 aa Download sequence
MDSDLDPFDG IFSEPDFAHA ARAGGKFQPR AKPRARKVTS TSLPSVPPSI AKESSVSSFP 60 TTLDTIKPAV SVDPVDDRLT NLVGSSLVSS SRSLGSKEHL ENHDNNLTCQ PVNSSTETVE 120 RREDLASPDC LPSEVVVTNG NKNGDSNFIT EAGSSGLDLD TFAGIVPDTT LSAEENPQIT 180 RETIASITLK LPDASNFQSI AVFNPSSREH VPKEDMSSND AQLAEVNSIG LDLDPFDDIV 240 LPPAISNVRA GGKFQPRGKT RLRKGTSEAV AFAVSGATVE GPARVVSTVS NNLQSSKFIN 300 VGDGRLMDSV YSSLITLESM ENNEVSRTDH CTNSGVVLSN VDRSSGLANY SHLVASDDAL 360 HLGVVDRDSH SGLGKSMGEN ADIFSELEYI HDFVTHSPSR TEIPLATSNE EETEGHSRFL 420 AQNSVNSSAL GACSQAILNA VTCNGTALQT DNGKPKSEFQ EQGSFANLKS FDNLSESAVA 480 LEHCTREIQP KPMVQNGKDK PSASILPDAV ESIVPPPNAQ FDPSENVYID EGSLPNFPSE 540 DVLDYSSMSF SNFISPDPTT SEFPMNEERI IAEASCSSDQ NILHQEDIPG VPARESSKNG 600 KIKSSSVSKL SQNSKQSSLV GEMNESGKSG RQLRKRIAAS QLDAPEDEAL DSDGFPSEPP 660 SNSIADEGDN DYDYRVDEDN DNEDRVENTS INKRASKKSK KTAAEQEKKP VRRRKRDNGP 720 PEQSNQQPRK KFSHSTLRKN RLKGLLSIPE DEIDFQKMPF KDIILLAGHK ESLATKEAKA 780 SKNASTNKST TNSFHGKDSH NEEDIGISEQ YGGCVDDQSN FLFNYHSFMD KTPTARWSKQ 840 DTELFYEGIR QFGTDLSMIQ QLFPGRTRHQ IKLKFKKEER QHPLRLSEAL NSRAKDHSYY 900 EKVIEQLQQV AAQAEQESNR GNSVSLTDEE AELNPETNGN CHWGDKRFQG SYATFEFSFF 960 H

Sequence ? help Back to Top

Protein Sequence Length: 961 aa Download sequence

MDSDLDPFDG IFSEPDFAHA ARAGGKFQPR AKPRARKVTS TSLPSVPPSI AKESSVSSFP  60
TTLDTIKPAV SVDPVDDRLT NLVGSSLVSS SRSLGSKEHL ENHDNNLTCQ PVNSSTETVE  120
RREDLASPDC LPSEVVVTNG NKNGDSNFIT EAGSSGLDLD TFAGIVPDTT LSAEENPQIT  180
RETIASITLK LPDASNFQSI AVFNPSSREH VPKEDMSSND AQLAEVNSIG LDLDPFDDIV  240
LPPAISNVRA GGKFQPRGKT RLRKGTSEAV AFAVSGATVE GPARVVSTVS NNLQSSKFIN  300
VGDGRLMDSV YSSLITLESM ENNEVSRTDH CTNSGVVLSN VDRSSGLANY SHLVASDDAL  360
HLGVVDRDSH SGLGKSMGEN ADIFSELEYI HDFVTHSPSR TEIPLATSNE EETEGHSRFL  420
AQNSVNSSAL GACSQAILNA VTCNGTALQT DNGKPKSEFQ EQGSFANLKS FDNLSESAVA  480
LEHCTREIQP KPMVQNGKDK PSASILPDAV ESIVPPPNAQ FDPSENVYID EGSLPNFPSE  540
DVLDYSSMSF SNFISPDPTT SEFPMNEERI IAEASCSSDQ NILHQEDIPG VPARESSKNG  600
KIKSSSVSKL SQNSKQSSLV GEMNESGKSG RQLRKRIAAS QLDAPEDEAL DSDGFPSEPP  660
SNSIADEGDN DYDYRVDEDN DNEDRVENTS INKRASKKSK KTAAEQEKKP VRRRKRDNGP  720
PEQSNQQPRK KFSHSTLRKN RLKGLLSIPE DEIDFQKMPF KDIILLAGHK ESLATKEAKA  780
SKNASTNKST TNSFHGKDSH NEEDIGISEQ YGGCVDDQSN FLFNYHSFMD KTPTARWSKQ  840
DTELFYEGIR QFGTDLSMIQ QLFPGRTRHQ IKLKFKKEER QHPLRLSEAL NSRAKDHSYY  900
EKVIEQLQQV AAQAEQESNR GNSVSLTDEE AELNPETNGN CHWGDKRFQG SYATFEFSFF  960
H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	709	715	KPVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-39	MYB_related family protein