PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021660370.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 978aa MW: 107083 Da PI: 4.5193

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021660370.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	6.8e-10	834	875	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rW++++ el++++++q+G++ + I + ++ gRt+ q+k+++ k XP_021660370.1 834 RWSKQDTELFYEGIRQFGTD-LSMIQQLFP-GRTRHQIKLKFKK 875 9*****************.*****.********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 978 aa Download sequence
MDSDLDPFDG IFSEPDFAHA ARAGGKFQPR AKPRARKVTS TSLPSVPPSI AKESSVSSFP 60 TTLDTIKPAV SVDPVDDRLT NLVGSSLVSS SRSLGSKEHL ENHDNNLTCQ PVNSSTETVE 120 RREDLASPDC LPSEVVVTNG NKNGDSNFIT EAGSSGLDLD TFAGIVPDTT LSAEENPQIT 180 RETIASITLK LPDASNFQSI AVFNPSSREH VPKEDMSSND AQLAEVNSIG LDLDPFDDIV 240 LPPAISNVRA GGKFQPRGKT RLRKGTSEAV AFAVSGATVE GPARVVSTVS NNLQSSKFIN 300 VGDGRLMDSV YSSLITLESM ENNEVSRTDH CTNSGVVLSN VDRSSGLANY SHLVASDDAL 360 HLGVVDRDSH SGLGKSMGEN ADIFSELEYI HDFVTHSPSR TEIPLATSNE EETEGHSRFL 420 AQNSVNSSAL GACSQAILNA VTCNGTALQT DNGKPKSEEQ GSFANLKSFD NLSESAVALE 480 HCTREIQPKP MVQNGKDKPS ASILPDAVES IVPPPNAQFD PSENVYIDEG SLPNFPSEDV 540 LDYSSMSFSN FISPDPTTSE FPMNEERIIA EASCSSDQNI LHQEDIPGVP ARESSKNGKI 600 KSSSVSKLSQ NSKQSSLVGE MNESGKSGRQ LRKRIAASQL DAPEDEALDS DGFPSEPPSN 660 SIADEGDNDY DYRVDEDNDN EDRVENTSIN KRASKKSKKT AAEQEKKPVR RRKRDNGPPE 720 QSNQQPRKKF SHSTLRKNRL KGLLSIPEDE IDFQKMPFKD IILLAGHKES LATKEAKASK 780 NASTNKSTTN SFHGKDSHNE EDIGISEQYG GCVDDQSNFL FNYHSFMDKT PTARWSKQDT 840 ELFYEGIRQF GTDLSMIQQL FPGRTRHQIK LKFKKEERQH PLRLSEALNS RAKDHSYYEK 900 VIEQLQQVAA QAEQESNRGN SVSLTDEEAE LNPETNEEVA KSDEQDEDGT VEDQNGDPLK 960 YDEDDDDFDL WSSYKSEF

Sequence ? help Back to Top

Protein Sequence Length: 978 aa Download sequence

MDSDLDPFDG IFSEPDFAHA ARAGGKFQPR AKPRARKVTS TSLPSVPPSI AKESSVSSFP  60
TTLDTIKPAV SVDPVDDRLT NLVGSSLVSS SRSLGSKEHL ENHDNNLTCQ PVNSSTETVE  120
RREDLASPDC LPSEVVVTNG NKNGDSNFIT EAGSSGLDLD TFAGIVPDTT LSAEENPQIT  180
RETIASITLK LPDASNFQSI AVFNPSSREH VPKEDMSSND AQLAEVNSIG LDLDPFDDIV  240
LPPAISNVRA GGKFQPRGKT RLRKGTSEAV AFAVSGATVE GPARVVSTVS NNLQSSKFIN  300
VGDGRLMDSV YSSLITLESM ENNEVSRTDH CTNSGVVLSN VDRSSGLANY SHLVASDDAL  360
HLGVVDRDSH SGLGKSMGEN ADIFSELEYI HDFVTHSPSR TEIPLATSNE EETEGHSRFL  420
AQNSVNSSAL GACSQAILNA VTCNGTALQT DNGKPKSEEQ GSFANLKSFD NLSESAVALE  480
HCTREIQPKP MVQNGKDKPS ASILPDAVES IVPPPNAQFD PSENVYIDEG SLPNFPSEDV  540
LDYSSMSFSN FISPDPTTSE FPMNEERIIA EASCSSDQNI LHQEDIPGVP ARESSKNGKI  600
KSSSVSKLSQ NSKQSSLVGE MNESGKSGRQ LRKRIAASQL DAPEDEALDS DGFPSEPPSN  660
SIADEGDNDY DYRVDEDNDN EDRVENTSIN KRASKKSKKT AAEQEKKPVR RRKRDNGPPE  720
QSNQQPRKKF SHSTLRKNRL KGLLSIPEDE IDFQKMPFKD IILLAGHKES LATKEAKASK  780
NASTNKSTTN SFHGKDSHNE EDIGISEQYG GCVDDQSNFL FNYHSFMDKT PTARWSKQDT  840
ELFYEGIRQF GTDLSMIQQL FPGRTRHQIK LKFKKEERQH PLRLSEALNS RAKDHSYYEK  900
VIEQLQQVAA QAEQESNRGN SVSLTDEEAE LNPETNEEVA KSDEQDEDGT VEDQNGDPLK  960
YDEDDDDFDL WSSYKSEF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	707	713	KPVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	3e-39	MYB_related family protein