PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659879.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

G2-like

Protein Properties

Length: 482aa MW: 52948.9 Da PI: 5.754

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659879.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.6	1.6e-34	263	317	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_021659879.1 263 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVDGLTIYHVKSHLQKYRT 317 79****************************************************8 PP
2	Myb_DNA-binding	56.2	8e-18	265	316	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m g+t +++ks++qky+ XP_021659879.1 265 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvDGLTIYHVKSHLQKYR 316 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MEARTALSIQ RSGAKQLSNL GLSAALSSSL PVLPTSLEET YPKLSDSQQV SMERGLMTKP 60 VVHASQLTAN SGAVGHLFSS SAGFSSDLQY SSVSPLEKHS RNTPFISQSS TNVTALTLPQ 120 SSHSRFLQST TSCQYVKETN ASWCPESLPG FLDFPVNNPV QNNQIEGNSC GVIASEEFSI 180 RSDWQEWAEQ LITDDDALTS NWSELLIDTS VSETETKTAY QVLKPSSNVP SHQPQVHQQC 240 PASSGEIRPV LTLTSSANTA PSKPRMRWTP ELHEAFVEAV NQLGGSERAT PKGVLKLMKV 300 DGLTIYHVKS HLQKYRTARY IPDSSEGSSE KKLTPMDEIS SLDLKKGIEI TEALRLQMEV 360 QKRLHEQLEI QRNLQLRIEE QGRYLQMIFE QQCNSGADKL KASSSAMENP SAVSSDAIHD 420 SPAKNETETS QSDHGKTKTD TIEAKSLLQE GSHDPSEKHK APKVEASENP DPDNCKRLRT 480 DA

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MEARTALSIQ RSGAKQLSNL GLSAALSSSL PVLPTSLEET YPKLSDSQQV SMERGLMTKP  60
VVHASQLTAN SGAVGHLFSS SAGFSSDLQY SSVSPLEKHS RNTPFISQSS TNVTALTLPQ  120
SSHSRFLQST TSCQYVKETN ASWCPESLPG FLDFPVNNPV QNNQIEGNSC GVIASEEFSI  180
RSDWQEWAEQ LITDDDALTS NWSELLIDTS VSETETKTAY QVLKPSSNVP SHQPQVHQQC  240
PASSGEIRPV LTLTSSANTA PSKPRMRWTP ELHEAFVEAV NQLGGSERAT PKGVLKLMKV  300
DGLTIYHVKS HLQKYRTARY IPDSSEGSSE KKLTPMDEIS SLDLKKGIEI TEALRLQMEV  360
QKRLHEQLEI QRNLQLRIEE QGRYLQMIFE QQCNSGADKL KASSSAMENP SAVSSDAIHD  420
SPAKNETETS QSDHGKTKTD TIEAKSLLQE GSHDPSEKHK APKVEASENP DPDNCKRLRT  480
DA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-110	G2-like family protein