PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659725.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

AP2

Protein Properties

Length: 486aa MW: 54385 Da PI: 8.8465

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659725.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.8	2.4e-17	178	227	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aaka+++a+ k++g XP_021659725.1 178 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAAKAYDRAAIKFRG 227 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 486 aa Download sequence
MLDLNLDIIS SESSCDGHHQ HHHNNNNNNH KNMVVSRELE NNELPEEEAA SRAQMEDSGI 60 SNSSIIINIE EALTNPRDEN SSNSALIFDI LKKEKNDANH NNNAFRESDP LRDFTTHQPF 120 PVRNTGLELD LQSGFSKIRP QWLKLSQMEP SGGAELKIVQ EKQQQMRKSR RGPRSRSSQY 180 RGVTFYRRTG RWESHIWDCG KQVYLGGFDT ALAAAKAYDR AAIKFRGVDA DINFNLSDYD 240 EDMKQMRNLG KEEFVHALRR KSTGYVRGSS KYRGVNLHKC GRWEARMGQF HGKKAYDIEA 300 IKCNGRDAVT NFEPSVYGGE IIFYSSSRGR SDHNLDLSLG ISSSANDSKA NNNVESAAST 360 PGLQTLHNLP IASKNLPTLS GIYPGFLPRN QERVAEKRVE ADSSPKSSSW LWKINGNNNN 420 NNVATVSEIS SSFAASSGFS SSATITASST TFPFNHQSHS VKNQFLTTPV TSTTNCFHYY 480 SKRSSN

Sequence ? help Back to Top

Protein Sequence Length: 486 aa Download sequence

MLDLNLDIIS SESSCDGHHQ HHHNNNNNNH KNMVVSRELE NNELPEEEAA SRAQMEDSGI  60
SNSSIIINIE EALTNPRDEN SSNSALIFDI LKKEKNDANH NNNAFRESDP LRDFTTHQPF  120
PVRNTGLELD LQSGFSKIRP QWLKLSQMEP SGGAELKIVQ EKQQQMRKSR RGPRSRSSQY  180
RGVTFYRRTG RWESHIWDCG KQVYLGGFDT ALAAAKAYDR AAIKFRGVDA DINFNLSDYD  240
EDMKQMRNLG KEEFVHALRR KSTGYVRGSS KYRGVNLHKC GRWEARMGQF HGKKAYDIEA  300
IKCNGRDAVT NFEPSVYGGE IIFYSSSRGR SDHNLDLSLG ISSSANDSKA NNNVESAAST  360
PGLQTLHNLP IASKNLPTLS GIYPGFLPRN QERVAEKRVE ADSSPKSSSW LWKINGNNNN  420
NNVATVSEIS SSFAASSGFS SSATITASST TFPFNHQSHS VKNQFLTTPV TSTTNCFHYY  480
SKRSSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	4e-77	AP2 family protein