PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659664.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 422aa MW: 47063 Da PI: 8.2211

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	350	395	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k + a++L +AveYIk+Lq XP_021659664.1 350 SIAERVRRTRISERMRKLQDLFPNM----DKQTNTADMLDLAVEYIKDLQ 395 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MSLLYSPSFN YQDGELRRTQ EHMDLNHHHY HQEQHQHNSG LMRYRSAPSS FLDSLVNGTS 60 GHGGDGGGIE GENYRYFRSS SPEMDTMLAR YMSTLSGSED SNSRNLQEFE EKPAMKREME 120 DSQMVYQSLP VNDLTNNGNS LNVSNSLDNT YGVMNSMALK NSMQASKMST VNGSNLVRQN 180 SSPAVFFSNL GVDNGFTVTK DTGSFRACNG LNGDASLSTS RLNNHLSFPS GQRFLPRIAE 240 IGDENPGASS TEGNTGKRQY MNFANDSWDD SSSNDFKRLR SNDGNVFSGF NILDNQNGNS 300 GNRMTGLTHH LSLPKTASEM ATIEKFLQFQ GSSVPCKIRA KRGCATHPRS IAERVRRTRI 360 SERMRKLQDL FPNMDKQTNT ADMLDLAVEY IKDLQKQVKT LTDTRAKCTC SSKQKQYSNV 420 SA

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MSLLYSPSFN YQDGELRRTQ EHMDLNHHHY HQEQHQHNSG LMRYRSAPSS FLDSLVNGTS  60
GHGGDGGGIE GENYRYFRSS SPEMDTMLAR YMSTLSGSED SNSRNLQEFE EKPAMKREME  120
DSQMVYQSLP VNDLTNNGNS LNVSNSLDNT YGVMNSMALK NSMQASKMST VNGSNLVRQN  180
SSPAVFFSNL GVDNGFTVTK DTGSFRACNG LNGDASLSTS RLNNHLSFPS GQRFLPRIAE  240
IGDENPGASS TEGNTGKRQY MNFANDSWDD SSSNDFKRLR SNDGNVFSGF NILDNQNGNS  300
GNRMTGLTHH LSLPKTASEM ATIEKFLQFQ GSSVPCKIRA KRGCATHPRS IAERVRRTRI  360
SERMRKLQDL FPNMDKQTNT ADMLDLAVEY IKDLQKQVKT LTDTRAKCTC SSKQKQYSNV  420
SA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-68	bHLH family protein