PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021659266.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 399aa MW: 45628.5 Da PI: 4.2607

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021659266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.7	4.9e-16	165	249	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ +L++a ++ + +r++l+ W+ev++k++e ++er+ +qC+++++ l+k+ykk+k + + s s+++yf++++ XP_021659266.1 165 WTEHETFVLLDAWGDKFVQRGRKSLRSEEWQEVAEKVSEvSKIERTDTQCRNRLDTLKKKYKKEKINLADV-GASGSKWVYFKKMD 249 ***********************************762678**********************97.666679*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MDDTEDDARY PPNPYGVNHQ QGYGSSNRQK LPVKNSPYSR TVGNQYVDDD EEDENEGEDE 60 EELGEDDGEN NQNNGIQYVG KEVDDDDYDE DDEDADVDEE EDEEDNQKNY SRRINDVDLE 120 RHPKMRKLKS IVSSYEFAPR VPAPPVTASS APKPSFAGRN PLTDWTEHET FVLLDAWGDK 180 FVQRGRKSLR SEEWQEVAEK VSEVSKIERT DTQCRNRLDT LKKKYKKEKI NLADVGASGS 240 KWVYFKKMDM LMSTSAQQGG LSCGVDSGEY VFMSPKVYLN RANGLDEMRD SPGNSEAADE 300 VEDDSDGLPP KKRKFGRDRD EGSSFGLLAD SIQKFSEIYE RIENNKRQQM LELEKMRMDF 360 HRDLEMQKRQ IMERAQAEIA KIQQGDDDNN DISADNASG

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MDDTEDDARY PPNPYGVNHQ QGYGSSNRQK LPVKNSPYSR TVGNQYVDDD EEDENEGEDE  60
EELGEDDGEN NQNNGIQYVG KEVDDDDYDE DDEDADVDEE EDEEDNQKNY SRRINDVDLE  120
RHPKMRKLKS IVSSYEFAPR VPAPPVTASS APKPSFAGRN PLTDWTEHET FVLLDAWGDK  180
FVQRGRKSLR SEEWQEVAEK VSEVSKIERT DTQCRNRLDT LKKKYKKEKI NLADVGASGS  240
KWVYFKKMDM LMSTSAQQGG LSCGVDSGEY VFMSPKVYLN RANGLDEMRD SPGNSEAADE  300
VEDDSDGLPP KKRKFGRDRD EGSSFGLLAD SIQKFSEIYE RIENNKRQQM LELEKMRMDF  360
HRDLEMQKRQ IMERAQAEIA KIQQGDDDNN DISADNASG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	3e-70	Trihelix family protein